Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045755_P001 | Maize | nucleus | 71.26 | 75.44 |
| Os06t0283200-01 | Rice | nucleus | 36.21 | 36.83 |
| TraesCS7B01G119600.1 | Wheat | nucleus | 40.46 | 35.16 |
| TraesCS7A01G212900.1 | Wheat | nucleus | 40.34 | 33.09 |
| TraesCS7D01G214800.1 | Wheat | nucleus | 40.21 | 33.05 |
| VIT_17s0000g04770.t01 | Wine grape | nucleus | 23.71 | 28.4 |
| Solyc06g069360.2.1 | Tomato | nucleus | 23.2 | 27.69 |
| HORVU7Hr1G043160.1 | Barley | nucleus | 26.03 | 27.63 |
| KRH56752 | Soybean | nucleus | 13.79 | 27.3 |
| PGSC0003DMT400010393 | Potato | nucleus | 22.42 | 26.77 |
| GSMUA_Achr3P10630_001 | Banana | nucleus | 23.07 | 26.48 |
| KRH03187 | Soybean | nucleus | 19.97 | 25.37 |
| OQU92733 | Sorghum | nucleus | 12.11 | 11.65 |
| OQU84317 | Sorghum | nucleus | 11.98 | 7.43 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | EntrezGene:8073738 | UniProt:C5Z8M1 | ncoils:Coil | EnsemblPlants:EER88243 |
| ProteinID:EER88243 | ProteinID:EER88243.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 |
| PFscan:PS50089 | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF132 | SMART:SM00184 | SMART:SM00249 | EnsemblPlantsGene:SORBI_3010G118000 |
| SUPFAM:SSF57850 | SUPFAM:SSF57903 | UniParc:UPI0001A895A6 | RefSeq:XP_002436876.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:12993551..12996964
Molecular Weight (calculated)
84435.1 Da
IEP (calculated)
8.195
GRAVY (calculated)
-0.620
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALAAVDSS APPPPSESSK GKGKMDDDVE AEGAEKMCGI CYVDGRRAIR GELDCCAHFF CFVCIMAWGR VESRCPFCKA RFRTIRRPPV AGRFPDERIV
101: SVPERNQVYN PQGNGSSTVG GDPYVNTICT VCSSSSDDEL LLLCELCDSA AHTYCVGLGN AVPEGDWFCK DCGTIRDDQL RWQAENQAEF EIGVNVPDAE
201: PVPDPLVSGV VDEEHDLERT DARSGGGGSM SDPVPSIYDI VDDDFATIAG IFRRRIPEDN RPQGTSAGSQ CPRSTQGRDN GLAAYHARIR LEVERARTLR
301: NSRNLDKRIR ELRENWAALR DGSVGFAPHM PGRRRKDMAG SASVPTEHQR YAEPETISSR NGTTAASVPL RTPLSEETST SLGHSKKVLH KDTRDARKAW
401: KRLEMAKSSG GRKISNTPAS LNCSSPFSMG NRSTSYSPID TIVGHKNQNL PNKFCQKSNS ICGHGTKAEH TPPANNSRGC HSLPENNRAS VHERMISFQN
501: RINQESLDGK VASSTHNRHV DQSLVSSCST RRSEKLKSDM LHPQKYSSSS GQSAVTSSLQ LGPSVESGSQ CTMMVNPEES SAVCVEGIAA TIEGTKSSSP
601: SLQLRPGVGS GSQSTMMVNL EDSSAVCGEG IDATIEVTKS SSPDRLERKR KHSSERCHDQ GSKRSRSTCK IAKSEISSLA IRELKLLKID KTHGSDRFKE
701: VARTATHSIL AACRFEHSPS QSLALSRPVC KHSPKVKQLK SSAITDFCKE CLRNFVKEAV SLALSGKQMD QTGTSY
101: SVPERNQVYN PQGNGSSTVG GDPYVNTICT VCSSSSDDEL LLLCELCDSA AHTYCVGLGN AVPEGDWFCK DCGTIRDDQL RWQAENQAEF EIGVNVPDAE
201: PVPDPLVSGV VDEEHDLERT DARSGGGGSM SDPVPSIYDI VDDDFATIAG IFRRRIPEDN RPQGTSAGSQ CPRSTQGRDN GLAAYHARIR LEVERARTLR
301: NSRNLDKRIR ELRENWAALR DGSVGFAPHM PGRRRKDMAG SASVPTEHQR YAEPETISSR NGTTAASVPL RTPLSEETST SLGHSKKVLH KDTRDARKAW
401: KRLEMAKSSG GRKISNTPAS LNCSSPFSMG NRSTSYSPID TIVGHKNQNL PNKFCQKSNS ICGHGTKAEH TPPANNSRGC HSLPENNRAS VHERMISFQN
501: RINQESLDGK VASSTHNRHV DQSLVSSCST RRSEKLKSDM LHPQKYSSSS GQSAVTSSLQ LGPSVESGSQ CTMMVNPEES SAVCVEGIAA TIEGTKSSSP
601: SLQLRPGVGS GSQSTMMVNL EDSSAVCGEG IDATIEVTKS SSPDRLERKR KHSSERCHDQ GSKRSRSTCK IAKSEISSLA IRELKLLKID KTHGSDRFKE
701: VARTATHSIL AACRFEHSPS QSLALSRPVC KHSPKVKQLK SSAITDFCKE CLRNFVKEAV SLALSGKQMD QTGTSY
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.