Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053989_P003 | Maize | plastid | 79.47 | 75.84 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 5.67 | 58.2 |
| TraesCS3D01G287700.1 | Wheat | nucleus | 53.83 | 52.62 |
| TraesCS3A01G287900.3 | Wheat | nucleus | 53.67 | 51.34 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 53.43 | 50.64 |
| Os12t0209700-01 | Rice | nucleus | 20.45 | 45.55 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 33.79 | 31.76 |
| Solyc12g055910.1.1 | Tomato | nucleus | 30.51 | 31.21 |
| AT4G10930.1 | Thale cress | nucleus | 29.23 | 30.94 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 31.47 | 30.73 |
| CDY05126 | Canola | nucleus | 27.96 | 30.7 |
| CDX90783 | Canola | nucleus | 28.11 | 30.69 |
| KRH41328 | Soybean | nucleus | 30.99 | 29.98 |
| KRH60053 | Soybean | nucleus | 30.91 | 29.61 |
| Bra000729.1-P | Field mustard | nucleus | 27.8 | 29.39 |
| EER88243 | Sorghum | nucleus | 7.43 | 11.98 |
| OQU92733 | Sorghum | nucleus | 5.11 | 7.93 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:C5XTW4 | ProteinID:EES04464.2 | InterPro:EloA-BP1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 | ProteinID:OQU84316.1 |
| EnsemblPlants:OQU84317 | ProteinID:OQU84317 | ProteinID:OQU84317.1 | PFAM:PF00628 | PFAM:PF13639 | PFAM:PF15870 |
| ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF76 | SMART:SM00184 |
| SMART:SM00249 | EnsemblPlantsGene:SORBI_3004G031700 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | UniParc:UPI0007F30744 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:2554115..2562660
Molecular Weight (calculated)
137267.0 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.767
Length
1252 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFPWEMDVDG ESSATLGQME DLGKFSSENE SCGICRDIII DRGVLDCCSH WFCYTCIDNW AAITKRCPLC KSEFQHITCT PVYGTIGATD EDEYSLTSCD
0101: DDWYVQEENS TLSFPSYYID AEAVVCLDDG DCKIRNGLVA AEDDSTLDTS IACDSCDKWY HAICVGFNPA MASDNSWLCP RCKFNEVEHE ADVILKQNFS
0201: EECMIGSDRT ATNASFSGRV SVSVADEGET ALVVSMVGVH SETRSGISET SLGLKTAHET FNCSSYPSHS KDALVADASS LRNTDIFSTS QNKPSETNVV
0301: HPLYPEPTET SLQFSPIREP ATTIFSSEQG NMSTERLEVP KLVSSCPVVD NGKEAKSTGE ENSVEQSNNE LSPVTKSPQP FLSDEVQQMK TAQNLQLPLR
0401: HDGHNSDDMK HEDMESGNEV IHPAKKAKLE VQEQDINVIG SSGFSSTHSH TTSPVKATDD DMPESVAQQK SIPDIMSIVE GDVYRRDPGR ELAKPVGRRA
0501: GDKPGPRVKK IFRKEEGKES SALVQKLQKE IREVVRDTGT NILEKDGSFD EKLLSAFRAA IGKSVDGPAK STNTNQLLRT RRSLLQKGKK RENLTKKLYG
0601: TSTGRRRSDW HRDWEVEFWK YRCSPGINPE KIETLQSVLQ LLKKSSEMDK ESAKGKKEEN NNNSILSRLY LADASVVPRK DGIRPLSALA GCAPLDKSSQ
0701: IKANGNKSSN IPAAGTETMK ISSPSSTGKA SSSSILNKEA SSRRENRNSQ PSQDKRNQSS GDIKQDKRKW ALEILARKNA SSATSKDQTG GTDALKGNFP
0801: LLAQLPMDMR PQLAAGSNKK VPVSVRQAQL HRIAEHYLQK ANLDVIRRCA DTELAIADAV NVEMGIYERS NSKSIYVNLC SQATRQHAKA KSDNDTSNLT
0901: KRTESGSDQI SQEVTSEDTN VSGSDVEEAL NRAAVSDQKS ELGDDTALEH TVHKDTVSFS SAEDALRKAG LFDSPPNSPD RGTTEVEGES RLEEPSKNLQ
1001: SNPEDVSSLK DDNSSLPTDL DAANCQSLDT MSQQHERNSE EQQKLTSKGE TEDVAAKKIN AANLTEVDRC SEQCEKSSGP GKEISVDCSV PDKVPGHAGA
1101: SREMIKVAST SPNQSHGEVI SKPKNSEAPK EKSRSDKPSV NSKDPKADKA KHAAEAGDDP KKRASDQAGK NTPDASNSTY KKVEMFVKEQ IRPLCKSGVI
1201: TVDQYKWAVV KTTDKVMSFH RDAKNANFLI KEGDKVKKLA LQYVEASQQK IS
0101: DDWYVQEENS TLSFPSYYID AEAVVCLDDG DCKIRNGLVA AEDDSTLDTS IACDSCDKWY HAICVGFNPA MASDNSWLCP RCKFNEVEHE ADVILKQNFS
0201: EECMIGSDRT ATNASFSGRV SVSVADEGET ALVVSMVGVH SETRSGISET SLGLKTAHET FNCSSYPSHS KDALVADASS LRNTDIFSTS QNKPSETNVV
0301: HPLYPEPTET SLQFSPIREP ATTIFSSEQG NMSTERLEVP KLVSSCPVVD NGKEAKSTGE ENSVEQSNNE LSPVTKSPQP FLSDEVQQMK TAQNLQLPLR
0401: HDGHNSDDMK HEDMESGNEV IHPAKKAKLE VQEQDINVIG SSGFSSTHSH TTSPVKATDD DMPESVAQQK SIPDIMSIVE GDVYRRDPGR ELAKPVGRRA
0501: GDKPGPRVKK IFRKEEGKES SALVQKLQKE IREVVRDTGT NILEKDGSFD EKLLSAFRAA IGKSVDGPAK STNTNQLLRT RRSLLQKGKK RENLTKKLYG
0601: TSTGRRRSDW HRDWEVEFWK YRCSPGINPE KIETLQSVLQ LLKKSSEMDK ESAKGKKEEN NNNSILSRLY LADASVVPRK DGIRPLSALA GCAPLDKSSQ
0701: IKANGNKSSN IPAAGTETMK ISSPSSTGKA SSSSILNKEA SSRRENRNSQ PSQDKRNQSS GDIKQDKRKW ALEILARKNA SSATSKDQTG GTDALKGNFP
0801: LLAQLPMDMR PQLAAGSNKK VPVSVRQAQL HRIAEHYLQK ANLDVIRRCA DTELAIADAV NVEMGIYERS NSKSIYVNLC SQATRQHAKA KSDNDTSNLT
0901: KRTESGSDQI SQEVTSEDTN VSGSDVEEAL NRAAVSDQKS ELGDDTALEH TVHKDTVSFS SAEDALRKAG LFDSPPNSPD RGTTEVEGES RLEEPSKNLQ
1001: SNPEDVSSLK DDNSSLPTDL DAANCQSLDT MSQQHERNSE EQQKLTSKGE TEDVAAKKIN AANLTEVDRC SEQCEKSSGP GKEISVDCSV PDKVPGHAGA
1101: SREMIKVAST SPNQSHGEVI SKPKNSEAPK EKSRSDKPSV NSKDPKADKA KHAAEAGDDP KKRASDQAGK NTPDASNSTY KKVEMFVKEQ IRPLCKSGVI
1201: TVDQYKWAVV KTTDKVMSFH RDAKNANFLI KEGDKVKKLA LQYVEASQQK IS
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.