Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G287900.3 | Wheat | nucleus | 95.63 | 93.58 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 90.94 | 88.19 |
| OQU84317 | Sorghum | nucleus | 52.62 | 53.83 |
| Os12t0209700-01 | Rice | nucleus | 23.03 | 52.49 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 5.0 | 52.46 |
| Zm00001d053989_P003 | Maize | plastid | 52.93 | 51.68 |
| AT4G10930.1 | Thale cress | nucleus | 29.51 | 31.95 |
| CDX90783 | Canola | nucleus | 28.57 | 31.91 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 33.18 | 31.91 |
| Solyc12g055910.1.1 | Tomato | nucleus | 30.45 | 31.86 |
| CDY05126 | Canola | nucleus | 28.26 | 31.75 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 30.68 | 30.66 |
| Bra000729.1-P | Field mustard | nucleus | 28.18 | 30.49 |
| KRH60053 | Soybean | nucleus | 30.91 | 30.3 |
| KRH41328 | Soybean | nucleus | 30.29 | 29.98 |
| TraesCS7D01G214800.1 | Wheat | nucleus | 8.9 | 12.08 |
| TraesCS2D01G092600.1 | Wheat | nucleus | 6.56 | 9.69 |
| TraesCS4D01G187800.1 | Wheat | nucleus | 5.23 | 7.66 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | ncoils:Coil | InterPro:EloA-BP1 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF13639 | PFAM:PF15870 | ScanProsite:PS00518 | PFscan:PS50016 |
| PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF76 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS3D01G287700 | EnsemblPlants:TraesCS3D01G287700.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:-:396602495..396609831
Molecular Weight (calculated)
139176.0 Da
IEP (calculated)
4.935
GRAVY (calculated)
-0.698
Length
1281 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPMQMDVDGQ PGEALEEMDN LESYTSENEI CGICRDIVID RGVLDGCQHW FCYTCIDNWS AITNRCPLCK IEFQNITSTP VYDSTGTGDT IEDDYPLTSG
0101: DDDWYEPGES NTLSFPSYYI DAEAVVCLDG GDCIIRSGLV AAEDNSALDT SIACDSCDLW YHAICVGFNP ETTSEDSWLC PRCVSIEAKN ESEVVLKQNI
0201: SGDSDRTSTD ASFSGRVSVS VADDGETALV VSMVGVNSES KDDLQEGSLG SKTAQESFYC NSHPSCSIDD LSHEDVANAC ILRNKDISCS SHNKSSETNL
0301: TRMVSSEPTQ RSSELSAMRE SACILFSAEH GNVSNEQSEV PQDGLSYSLL CRNKEAESTG EDAALPRNSN GNSPVIKSAQ LSSAASKVAS TVDVDMINSD
0401: AVQKRKNDQN TQLPPMQDRQ NTSDMESGGE ISHPAKKAKL GVPDQEMDLI ANSGVSSSDC HATSIAAEVI ASDTSKIATQ NKYVPDIMSI VEGESYMRDP
0501: GRELAKPVGR RAGDKPGLRM KKILHKDGKE STAAVQKLQQ EIREVVRDNG ISILEKDNAF DEKLLTAFRS AIGKSMDGRA KKPNLSLARK SLLQKGKIRE
0601: NLTKKLYASS TGRRRSAWHR DREVDFWKHR CSPGINPEKI ETLQSVLQLL KKSSDTGMRK ESAEEKKAFL SRLYLADASV VPRKGDIKPL SAVEGCPPFD
0701: KNSQIKGDDS KSTNKPAPVS QTIKINSPNS TGKVLSSSTL SKEALSRREN KNGQAPQNKQ NPSAGDIKQD KRKWALEILA RKNASSIASK DQTEGTDDLS
0801: RNYPLLAKLP VDMRPQLTTG RHNKVPMSVR QAQLHRIAEY YLQSANLDVI RRCADTELAI ADAVNVENDI YGKSSSKSVY VNLCSQATRQ SAKPKPENDA
0901: STLTEKAEVS SDLISQQVTT ENTNSGSSNV EEALDTAGLL DIPATAGQTD KSELGGVLEQ NASENTVCFN SVEEALKRAG LFDSPPNSPE RKSTTAEGNS
1001: RTVSGSPIST QQKYTNTDDT YLVNLDSEPS GSLQSSSDSR VKDASSLKDE DDSSCQQPKC SSEDDQKLIP SGETTDATAN ETLSVNLAEA DKCSLQCEKT
1101: SQTDKETVAD IPDEGTGHVE NSKEMDITVS DLHNKSCHGN NVPKEGEGIS QAVKLEPGKE KSSSGNQELN RKHSKGNKLS THPAESVDSL KKPADPGNNS
1201: ASDSSSSVHK KVEMFVKENI RPLCKSGVIT VEQYRWAVAK TAEKVMKHHS EAKNANFLIK EGDKVKKLAL QYVEAAQQKI S
0101: DDDWYEPGES NTLSFPSYYI DAEAVVCLDG GDCIIRSGLV AAEDNSALDT SIACDSCDLW YHAICVGFNP ETTSEDSWLC PRCVSIEAKN ESEVVLKQNI
0201: SGDSDRTSTD ASFSGRVSVS VADDGETALV VSMVGVNSES KDDLQEGSLG SKTAQESFYC NSHPSCSIDD LSHEDVANAC ILRNKDISCS SHNKSSETNL
0301: TRMVSSEPTQ RSSELSAMRE SACILFSAEH GNVSNEQSEV PQDGLSYSLL CRNKEAESTG EDAALPRNSN GNSPVIKSAQ LSSAASKVAS TVDVDMINSD
0401: AVQKRKNDQN TQLPPMQDRQ NTSDMESGGE ISHPAKKAKL GVPDQEMDLI ANSGVSSSDC HATSIAAEVI ASDTSKIATQ NKYVPDIMSI VEGESYMRDP
0501: GRELAKPVGR RAGDKPGLRM KKILHKDGKE STAAVQKLQQ EIREVVRDNG ISILEKDNAF DEKLLTAFRS AIGKSMDGRA KKPNLSLARK SLLQKGKIRE
0601: NLTKKLYASS TGRRRSAWHR DREVDFWKHR CSPGINPEKI ETLQSVLQLL KKSSDTGMRK ESAEEKKAFL SRLYLADASV VPRKGDIKPL SAVEGCPPFD
0701: KNSQIKGDDS KSTNKPAPVS QTIKINSPNS TGKVLSSSTL SKEALSRREN KNGQAPQNKQ NPSAGDIKQD KRKWALEILA RKNASSIASK DQTEGTDDLS
0801: RNYPLLAKLP VDMRPQLTTG RHNKVPMSVR QAQLHRIAEY YLQSANLDVI RRCADTELAI ADAVNVENDI YGKSSSKSVY VNLCSQATRQ SAKPKPENDA
0901: STLTEKAEVS SDLISQQVTT ENTNSGSSNV EEALDTAGLL DIPATAGQTD KSELGGVLEQ NASENTVCFN SVEEALKRAG LFDSPPNSPE RKSTTAEGNS
1001: RTVSGSPIST QQKYTNTDDT YLVNLDSEPS GSLQSSSDSR VKDASSLKDE DDSSCQQPKC SSEDDQKLIP SGETTDATAN ETLSVNLAEA DKCSLQCEKT
1101: SQTDKETVAD IPDEGTGHVE NSKEMDITVS DLHNKSCHGN NVPKEGEGIS QAVKLEPGKE KSSSGNQELN RKHSKGNKLS THPAESVDSL KKPADPGNNS
1201: ASDSSSSVHK KVEMFVKENI RPLCKSGVIT VEQYRWAVAK TAEKVMKHHS EAKNANFLIK EGDKVKKLAL QYVEAAQQKI S
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.