Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G015670.1 | Barley | cytosol | 45.91 | 59.76 |
| TraesCS2B01G108800.1 | Wheat | nucleus | 80.05 | 56.06 |
| TraesCS2A01G094000.1 | Wheat | nucleus | 79.24 | 55.63 |
| Os07t0690300-01 | Rice | nucleus | 23.53 | 38.86 |
| GSMUA_Achr11P... | Banana | nucleus | 29.18 | 32.52 |
| Bra001159.1-P | Field mustard | nucleus | 17.65 | 32.01 |
| TraesCS4D01G187800.1 | Wheat | nucleus | 27.45 | 27.2 |
| GSMUA_Achr10P... | Banana | nucleus | 17.65 | 26.98 |
| CDY14653 | Canola | nucleus | 20.53 | 26.97 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 22.38 | 26.47 |
| KRG92939 | Soybean | nucleus | 23.64 | 23.89 |
| CDY05191 | Canola | nucleus | 21.34 | 22.76 |
| CDX74135 | Canola | nucleus | 22.26 | 22.44 |
| AT3G05670.2 | Thale cress | nucleus | 22.84 | 22.42 |
| KRH33855 | Soybean | nucleus | 20.3 | 22.28 |
| CDY27748 | Canola | cytosol | 9.0 | 21.85 |
| Bra039418.1-P | Field mustard | nucleus | 8.77 | 21.35 |
| Solyc01g100130.2.1 | Tomato | nucleus | 19.84 | 18.59 |
| PGSC0003DMT400063611 | Potato | nucleus | 19.61 | 17.91 |
| TraesCS7D01G214800.1 | Wheat | nucleus | 14.3 | 13.14 |
| TraesCS3D01G287700.1 | Wheat | nucleus | 9.69 | 6.56 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| PFAM:PF00628 | PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR22937 |
| PANTHER:PTHR22937:SF77 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2D01G092600 |
| EnsemblPlants:TraesCS2D01G092600.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | TIGR:cd16574 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:44075060..44080187
Molecular Weight (calculated)
97632.2 Da
IEP (calculated)
4.333
GRAVY (calculated)
-1.013
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAGGRAVLR RAKMGGDDDD EYVVDEEDEV EDDVEYAAAA CSDEDAGEEE AEEDELDADF NVAEEEVEDQ EEDDELEIET PESVKYRSGG RNVKEEDELD
101: ADFNVADEEV EDQEEDEELE IETPESVKYR SDGRNLKQED EFVDADFNGV EEEVEDQEED EELETEMLQP RNLPEARGKG RKVKPTGSSR QRHEDDDDYE
201: EEIEDEDEDF DPEVDEDEED EEEDVEEEDD DLGDYAPTRA TKVRPRNHLA KRKPAAGRQH RKRKSGSRVS KGKTRNGTSA RRRRSKRRVA DDYEDDEEEE
301: DDDDFVVKDD VEEEVNYRPR KKAKVGRKTR EGTAEPVAVG EAWPSVESDT SEFEFVTSDE DHAEKETPVA EPARIKRKKG RRKRGSESDS SSDSDYVISE
401: EELKDLGVPR PQETMPQLPS PPARRTIAPR RVDEKGKEPE EALKQICGIC LSEEQRATIQ GVLNCCSHYF CFACILEWSK VESRCPLCKR RFNTITKSSV
501: ADLGLGLRNA PVRVEKRDQV YQPTEDEMRR WLDPYENVVC IECNQGGDDN LMLLCDICDS SAHTFCVGLG REVPEGNWYC GGCRSSVEGP SHAQTQDRVV
601: HRGDSNMNTA DSSSGSLGRS TPSGVFQRPP PINVQPSLQG FDLNLSPIET PEEDKRAESH LSAEPVSTPT GRHATLDRRR ALNRRIRILL FRPRTATNAW
701: QNSIQHDRSA PGTEQNQRIT CTSTDVSPSC SRADFMQSQQ SSSHFVQSAS NLNQCTDEGG SNFREVANAK DQLIPIVKKS IKHICARSPL DQSSFTNVAR
801: RATHTILALS GIAHNKDRVV STPFPFPSHC CHACDGREPA FLMRTICSSC FNSFVGDVVS HIANMFS
101: ADFNVADEEV EDQEEDEELE IETPESVKYR SDGRNLKQED EFVDADFNGV EEEVEDQEED EELETEMLQP RNLPEARGKG RKVKPTGSSR QRHEDDDDYE
201: EEIEDEDEDF DPEVDEDEED EEEDVEEEDD DLGDYAPTRA TKVRPRNHLA KRKPAAGRQH RKRKSGSRVS KGKTRNGTSA RRRRSKRRVA DDYEDDEEEE
301: DDDDFVVKDD VEEEVNYRPR KKAKVGRKTR EGTAEPVAVG EAWPSVESDT SEFEFVTSDE DHAEKETPVA EPARIKRKKG RRKRGSESDS SSDSDYVISE
401: EELKDLGVPR PQETMPQLPS PPARRTIAPR RVDEKGKEPE EALKQICGIC LSEEQRATIQ GVLNCCSHYF CFACILEWSK VESRCPLCKR RFNTITKSSV
501: ADLGLGLRNA PVRVEKRDQV YQPTEDEMRR WLDPYENVVC IECNQGGDDN LMLLCDICDS SAHTFCVGLG REVPEGNWYC GGCRSSVEGP SHAQTQDRVV
601: HRGDSNMNTA DSSSGSLGRS TPSGVFQRPP PINVQPSLQG FDLNLSPIET PEEDKRAESH LSAEPVSTPT GRHATLDRRR ALNRRIRILL FRPRTATNAW
701: QNSIQHDRSA PGTEQNQRIT CTSTDVSPSC SRADFMQSQQ SSSHFVQSAS NLNQCTDEGG SNFREVANAK DQLIPIVKKS IKHICARSPL DQSSFTNVAR
801: RATHTILALS GIAHNKDRVV STPFPFPSHC CHACDGREPA FLMRTICSSC FNSFVGDVVS HIANMFS
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKTISNSD VASVISLKRK HSDCSGDDGN SETKPEIYES LNELKLEEEE ELTTVHHESR
0401: SPSNNTTVDI FSIVKGTGRR KNLMRSNPTD KSSEAENAAG LRVKKIKRTP EDEKESMVLV EKLRKEIREA VRNKSMEDIR ENQFDPKLLA AFRAAVAGPK
0501: TGEAPRRSSA LAVKAKKLML QKGKVRENLT KKIYADLNGK RKSAWHRDCE VEFWKHRCIQ GRKPEKIETL KSVLSLLKNK PADTKTNFSS ETPQASNPIL
0601: SRLYLADTSV FPRNDNLKPL LAPKEMGNSQ NNGKPTEASK TLPKISAAKG SSVKAAGSKL NSGNKQSDGQ PNLTSSNSKE MVENPDDLKK DKRKWALQVL
0701: ARKKALAGNN STQDKEGSPE LKGNYPLLAQ LPADMRPSLA TSRHNKVPVA VRQTQLYRLT EHLLKKENLL TIRRSAATEL AVADAINIEK AIADKSSSKV
0801: VYLNLCSQEI LHHSESKTMD NAVEPNSSSP MADSESERIS SKDSDNPAVL EALRAAGLAD SPPNSPTRSV EVLPEKGDSS LDKTRETGPY NVFDMDSVPD
0901: TDIFGDFEYE LDEEDYFGAT MAKKASVMQP DESLTKVKVV LSTVQPGKSL NPSEVVEDEE TTTENLNETT NGKEDGKSFV PMELVPEAEG EGEGEGEGEG
1001: EGEGGGEILS VAECEELYGP GTEKLVERPL IEGFAENGVK AKAPDSECES NTQREFIASN FEITCIQEKK LPRSIQKCKP SEKPSKEEKG KADGFGNSIT
1101: KKVEAYIKEH IRPLCKSGVI NVEQYRWAVT KTTEKVMKYH SKAKSANFLI KEGDKIKKLA EQYVETASSG AHHKDKCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKTISNSD VASVISLKRK HSDCSGDDGN SETKPEIYES LNELKLEEEE ELTTVHHESR
0401: SPSNNTTVDI FSIVKGTGRR KNLMRSNPTD KSSEAENAAG LRVKKIKRTP EDEKESMVLV EKLRKEIREA VRNKSMEDIR ENQFDPKLLA AFRAAVAGPK
0501: TGEAPRRSSA LAVKAKKLML QKGKVRENLT KKIYADLNGK RKSAWHRDCE VEFWKHRCIQ GRKPEKIETL KSVLSLLKNK PADTKTNFSS ETPQASNPIL
0601: SRLYLADTSV FPRNDNLKPL LAPKEMGNSQ NNGKPTEASK TLPKISAAKG SSVKAAGSKL NSGNKQSDGQ PNLTSSNSKE MVENPDDLKK DKRKWALQVL
0701: ARKKALAGNN STQDKEGSPE LKGNYPLLAQ LPADMRPSLA TSRHNKVPVA VRQTQLYRLT EHLLKKENLL TIRRSAATEL AVADAINIEK AIADKSSSKV
0801: VYLNLCSQEI LHHSESKTMD NAVEPNSSSP MADSESERIS SKDSDNPAVL EALRAAGLAD SPPNSPTRSV EVLPEKGDSS LDKTRETGPY NVFDMDSVPD
0901: TDIFGDFEYE LDEEDYFGAT MAKKASVMQP DESLTKVKVV LSTVQPGKSL NPSEVVEDEE TTTENLNETT NGKEDGKSFV PMELVPEAEG EGEGEGEGEG
1001: EGEGGGEILS VAECEELYGP GTEKLVERPL IEGFAENGVK AKAPDSECES NTQREFIASN FEITCIQEKK LPRSIQKCKP SEKPSKEEKG KADGFGNSIT
1101: KKVEAYIKEH IRPLCKSGVI NVEQYRWAVT KTTEKVMKYH SKAKSANFLI KEGDKIKKLA EQYVETASSG AHHKDKCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.