Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G092600.1 | Wheat | nucleus | 38.86 | 23.53 |
| Os03t0302200-01 | Rice | nucleus | 34.48 | 22.65 |
| GSMUA_Achr10P... | Banana | nucleus | 23.05 | 21.34 |
| GSMUA_Achr11P... | Banana | nucleus | 30.67 | 20.69 |
| TraesCS2A01G094000.1 | Wheat | nucleus | 44.95 | 19.11 |
| TraesCS2B01G108800.1 | Wheat | nucleus | 43.62 | 18.5 |
| KRH33855 | Soybean | nucleus | 24.95 | 16.58 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 21.14 | 15.14 |
| CDY14653 | Canola | nucleus | 18.86 | 15.0 |
| KRG92939 | Soybean | nucleus | 23.81 | 14.57 |
| CDY05191 | Canola | nucleus | 22.29 | 14.39 |
| CDX74135 | Canola | nucleus | 23.43 | 14.3 |
| Solyc01g100130.2.1 | Tomato | nucleus | 24.76 | 14.05 |
| PGSC0003DMT400063611 | Potato | nucleus | 25.14 | 13.91 |
| AT3G05670.2 | Thale cress | nucleus | 22.86 | 13.59 |
| Bra001159.1-P | Field mustard | nucleus | 11.43 | 12.55 |
| HORVU2Hr1G015670.1 | Barley | cytosol | 14.1 | 11.11 |
| Os06t0283200-01 | Rice | nucleus | 10.86 | 7.47 |
| Bra039418.1-P | Field mustard | nucleus | 2.67 | 3.93 |
| CDY27748 | Canola | cytosol | 2.67 | 3.92 |
| Os06t0283300-01 | Rice | plasma membrane | 3.05 | 3.69 |
| Os12t0209700-01 | Rice | nucleus | 0.95 | 0.89 |
Protein Annotations
| EnsemblPlants:Os07t0690300-01 | EnsemblPlantsGene:Os07g0690300 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF77 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:BAC83508.1 | ProteinID:BAF22625.1 | ProteinID:BAT03328.1 | ScanProsite:PS00518 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI00001BF353 | UniProt:Q7F0H9 | MapMan:35.2 | : | : |
Description
RING finger proteinZinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0690300-01);Hypothetical conserved gene. (Os07t0690300-02)
Coordinates
chr7:-:29353073..29357315
Molecular Weight (calculated)
59681.9 Da
IEP (calculated)
4.283
GRAVY (calculated)
-1.170
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTGGGRVAL DGGGRRRRKL DEEDDEEYVA DDDEEEDEDE DEEEYQQAAA PSDDGEEGGD DEAEPEDESD ADFVGDEEEE EEDLEDEDDL EEVKAPRPKR
101: PPKGKPPPRS RRRRQKDDDD DYEEEEEEDA DFDPDVDEDD EEEVDEDEEE FEQDDDDSDD FAPIRVRKTS TKNHVAKRKP PPGRKKKKRK PSRVSKAKPK
201: KPTSGRRRRK RWATDDDEEE EDDADFIVED DQEEEEDDHR PKKKAKAARK TRDVTPEPDV EASAWPAVES DTSEFEFVTS DEEAADKEAP AAEPAKTKGK
301: KGRKRWGSGS ESSSDSDYVI SEQELKDLEV SMPPDAALQS PATLPRRTFL SRRVGEKGKE PEEAWKQTCG ICLSEEQRAT IQGVLNCCAH YFCFACIMEW
401: SKVESRCPLC KRRFTTITKS SMADLGLGSR KAVIRVEKRD QVMASLSYCY LFSFARIIAI EFNICNVSKP LSVVWHLHGN SSICQCPLTS YCKRHDYLTP
501: CEIPCGCMLL HLAVIFSSKC SSFYL
101: PPKGKPPPRS RRRRQKDDDD DYEEEEEEDA DFDPDVDEDD EEEVDEDEEE FEQDDDDSDD FAPIRVRKTS TKNHVAKRKP PPGRKKKKRK PSRVSKAKPK
201: KPTSGRRRRK RWATDDDEEE EDDADFIVED DQEEEEDDHR PKKKAKAARK TRDVTPEPDV EASAWPAVES DTSEFEFVTS DEEAADKEAP AAEPAKTKGK
301: KGRKRWGSGS ESSSDSDYVI SEQELKDLEV SMPPDAALQS PATLPRRTFL SRRVGEKGKE PEEAWKQTCG ICLSEEQRAT IQGVLNCCAH YFCFACIMEW
401: SKVESRCPLC KRRFTTITKS SMADLGLGSR KAVIRVEKRD QVMASLSYCY LFSFARIIAI EFNICNVSKP LSVVWHLHGN SSICQCPLTS YCKRHDYLTP
501: CEIPCGCMLL HLAVIFSSKC SSFYL
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.