Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001159.1-P | Field mustard | nucleus | 21.34 | 34.73 |
| GSMUA_Achr10P... | Banana | nucleus | 23.39 | 32.1 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 29.31 | 31.11 |
| Os07t0690300-01 | Rice | nucleus | 20.69 | 30.67 |
| CDY14653 | Canola | nucleus | 25.71 | 30.3 |
| TraesCS2D01G092600.1 | Wheat | nucleus | 32.52 | 29.18 |
| Os03t0302200-01 | Rice | nucleus | 29.18 | 28.41 |
| HORVU2Hr1G015670.1 | Barley | cytosol | 24.29 | 28.38 |
| KRG92939 | Soybean | nucleus | 30.85 | 27.97 |
| OQU92733 | Sorghum | nucleus | 28.79 | 27.76 |
| CDY05191 | Canola | nucleus | 27.64 | 26.45 |
| KRH33855 | Soybean | nucleus | 26.61 | 26.2 |
| CDX74135 | Canola | nucleus | 28.53 | 25.81 |
| TraesCS4A01G117900.1 | Wheat | nucleus | 28.15 | 25.14 |
| TraesCS4D01G187800.1 | Wheat | nucleus | 28.28 | 25.14 |
| TraesCS4B01G186500.1 | Wheat | nucleus | 27.51 | 24.65 |
| AT3G05670.2 | Thale cress | nucleus | 27.76 | 24.46 |
| CDY27748 | Canola | cytosol | 11.05 | 24.09 |
| HORVU4Hr1G054580.2 | Barley | nucleus, plastid | 28.53 | 23.9 |
| Bra039418.1-P | Field mustard | nucleus | 10.93 | 23.88 |
| TraesCS2B01G108800.1 | Wheat | nucleus | 35.6 | 22.37 |
| TraesCS2A01G094000.1 | Wheat | nucleus | 35.22 | 22.19 |
| Zm00001d047676_P002 | Maize | nucleus | 27.64 | 20.65 |
| Solyc01g100130.2.1 | Tomato | nucleus | 24.16 | 20.32 |
| PGSC0003DMT400063611 | Potato | nucleus | 23.91 | 19.6 |
| GSMUA_Achr3P10630_001 | Banana | nucleus | 15.42 | 17.75 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 9.77 | 5.71 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr11G05300_001 | EnsemblPlants:GSMUA_Achr11P05300_001 | EnsemblPlants:GSMUA_Achr11T05300_001 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| UniProt:M0RPL0 | PFAM:PF00628 | PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 |
| PANTHER:PTHR22937 | PANTHER:PTHR22937:SF77 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 |
| UniParc:UPI0002949A83 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G05300_001]
Coordinates
chr11:-:3932625..3937867
Molecular Weight (calculated)
87787.5 Da
IEP (calculated)
5.228
GRAVY (calculated)
-1.018
Length
778 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGGRVVYK RAAAGRRRRR RSKASDDDDD DDDEEYVLGE EEEEESSDEP LASDGEEDEY EFGESTGGSD EDDEQEFLAP RSKPRKAPSK PKRRVKKSRV
101: WDDDDDDDYE EEEEEEEEDE EEEEDRVDFS IRKKGERRKK AGVRSRRQKP RASDSEEEVR EEEDDDGDED FSPDEQDFED EEASVISEFK RKGGNPKQGG
201: KKRKPRALKR KKGKRSRPHR SGEDDDFIVK DRVAVDRKSK KPKETGRRKV STSWAIKNKS PVESDTSDFD FVTSDDDFMG DTVLLNRPEI NNKYFRKTNT
301: KRTRGKVMVS SDKSESSLDG DYMISEEELR DLGVGGVLDQ PQLKRISAGM KGDKKGKEKE NDELGKPLCG ICLSEEQRMT VRGVLNCCTH YFCFACIMEW
401: SKVESRCPVC KRRFGTITKS SRSDPGFGLR KAVIKVEKRD QVYQPSEEEI RRMMDPYENV VCIECHQGGD DSLMLLCDIC DSPAHTYCVG LGREVPEGNW
501: YCECCRSAGD GSSYLQNERI VTDQAANSSD FLVTPVRTED VAVRDNTNLQ RSGQPSMQEI DLNVSPRSVE DYGSTSQFFG AGAATLSGRR AIHQRIRILL
601: SNSRPRQISA ETDVLRDNMA SGVMTSEVRD SGENLHSSQG FSSWTRGSAA EQCHHNNRPS VQSNANLVQC ATESSSFQHV NGAKEQVHSM VKSHLKELSS
701: GSPLDRITFK EFARRSTHTV LAACGIKHHR RMVSVPVHPP GCCSHVSDQE QVVVTQGCCL SCFSSYVKDV VQKILHAT
101: WDDDDDDDYE EEEEEEEEDE EEEEDRVDFS IRKKGERRKK AGVRSRRQKP RASDSEEEVR EEEDDDGDED FSPDEQDFED EEASVISEFK RKGGNPKQGG
201: KKRKPRALKR KKGKRSRPHR SGEDDDFIVK DRVAVDRKSK KPKETGRRKV STSWAIKNKS PVESDTSDFD FVTSDDDFMG DTVLLNRPEI NNKYFRKTNT
301: KRTRGKVMVS SDKSESSLDG DYMISEEELR DLGVGGVLDQ PQLKRISAGM KGDKKGKEKE NDELGKPLCG ICLSEEQRMT VRGVLNCCTH YFCFACIMEW
401: SKVESRCPVC KRRFGTITKS SRSDPGFGLR KAVIKVEKRD QVYQPSEEEI RRMMDPYENV VCIECHQGGD DSLMLLCDIC DSPAHTYCVG LGREVPEGNW
501: YCECCRSAGD GSSYLQNERI VTDQAANSSD FLVTPVRTED VAVRDNTNLQ RSGQPSMQEI DLNVSPRSVE DYGSTSQFFG AGAATLSGRR AIHQRIRILL
601: SNSRPRQISA ETDVLRDNMA SGVMTSEVRD SGENLHSSQG FSSWTRGSAA EQCHHNNRPS VQSNANLVQC ATESSSFQHV NGAKEQVHSM VKSHLKELSS
701: GSPLDRITFK EFARRSTHTV LAACGIKHHR RMVSVPVHPP GCCSHVSDQE QVVVTQGCCL SCFSSYVKDV VQKILHAT
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.