Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G117900.1 | Wheat | nucleus | 76.96 | 82.09 |
| TraesCS4D01G187800.1 | Wheat | nucleus | 75.24 | 79.89 |
| TraesCS4B01G186500.1 | Wheat | nucleus | 73.74 | 78.92 |
| Os03t0302200-01 | Rice | nucleus | 35.74 | 41.55 |
| OQU92733 | Sorghum | nucleus | 32.08 | 36.93 |
| Zm00001d047676_P002 | Maize | nucleus | 33.58 | 29.97 |
| GSMUA_Achr11P... | Banana | nucleus | 23.9 | 28.53 |
| GSMUA_Achr10P... | Banana | nucleus | 17.22 | 28.22 |
| Bra001159.1-P | Field mustard | nucleus | 13.78 | 26.78 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 20.13 | 25.51 |
| HORVU2Hr1G015670.1 | Barley | cytosol | 17.76 | 24.77 |
| KRH33855 | Soybean | nucleus | 20.88 | 24.56 |
| CDY14653 | Canola | nucleus | 17.44 | 24.55 |
| KRG92939 | Soybean | nucleus | 20.88 | 22.61 |
| CDY05191 | Canola | nucleus | 19.59 | 22.39 |
| AT3G05670.2 | Thale cress | nucleus | 20.88 | 21.97 |
| CDX74135 | Canola | nucleus | 19.59 | 21.16 |
| Solyc01g100130.2.1 | Tomato | nucleus | 20.24 | 20.32 |
| PGSC0003DMT400063611 | Potato | nucleus | 20.13 | 19.7 |
| CDY27748 | Canola | cytosol | 6.24 | 16.25 |
| Bra039418.1-P | Field mustard | nucleus | 6.03 | 15.73 |
| HORVU7Hr1G043160.1 | Barley | nucleus | 4.2 | 5.34 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | UniProt:A0A287P3T1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:HORVU4Hr1G054580 | EnsemblPlants:HORVU4Hr1G054580.2 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 |
| PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF77 |
| SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | UniParc:UPI000B4769C2 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:+:456283963..456288541
Molecular Weight (calculated)
104489.0 Da
IEP (calculated)
5.049
GRAVY (calculated)
-1.018
Length
929 amino acids
Sequence
(BLAST)
(BLAST)
001: PPTVRDASSA LPPPLVTSTL FPPSIPRFRA APLPAHQPRQ FPSPPPSLTR AYLYALIQNP RRRILSTNPS GVKLGGFPCQ PRLLLCSACP GMGTGEGGGR
101: RRRKLEGGDG DDSDEEYVLE EEDDDEEVDE LEYGRGGRDA ASFSAGEEGG GSDAEYEVDD EDEEEETPRP KRPVKRNANP AAARSRRRRY EDDDDYSEEQ
201: ELEEDEEDLD GEEEPRRPNF ATKCGAGGQK AEMPHVAQRS NRPRHAEEED MDFDPDLDEG EGDEDTDFDP DLEGDDDEFE DEEEEELGVS HTRTIPRLKN
301: TVRRNPASKQ RRGKKKNSNT SKVSKQKVRK PAPARRRRKR PVIEHYEDDD DFIVEDDQVK VNRNSRKKAR FGRQVEVDWP VPVAEADIWP AIDSDSSEFE
401: FGTSEDEPEG EPVRAAVRKG RKKRGLSGSS SDSEFHVLDK ELSDVREEEV KTKKRVRVLQ SSSDSEFHLS DKEMSDVREE VKRKKRTCVL QSSSESEFHA
501: SDKESGDIRI EETRRKKRLL VSQSSSDSEF HVSDKDARDS GEAKSLVAQP MLSVSPKRLC FTRNGGDKGK EKKELVDSGK PWCGICLSED QRMTLQGVLN
601: CCSHYFCFAC IMEWSKVESR CPLCKRRFNT ITKSSKVGLG LELKKSVIKV EERDQVYQPT EEEIRRWLDP YENLVCIECN QGGEDSLMLL CDICDSSAHT
701: YCVGLGREVP EGNWYCGGCR LSGEGSMHPR SLTNSNSAQL GTAAPISTFG RSPSINPWQT FQGFDLNVSP RDIPRQNIHA DSRASTFGAS TPTGRLATLS
801: RRRRLIHILL DRQRQPVSQD TGYDGVQHSG YAPRADPDHR NFSASSESHS LQHNDSLPRI EPNCRNFSGP WEANSSQTLL DDIRDQHSYF SSVQAQRNST
901: PCLFVDGNNF QHTESVNSNV KHTCSISPH
101: RRRKLEGGDG DDSDEEYVLE EEDDDEEVDE LEYGRGGRDA ASFSAGEEGG GSDAEYEVDD EDEEEETPRP KRPVKRNANP AAARSRRRRY EDDDDYSEEQ
201: ELEEDEEDLD GEEEPRRPNF ATKCGAGGQK AEMPHVAQRS NRPRHAEEED MDFDPDLDEG EGDEDTDFDP DLEGDDDEFE DEEEEELGVS HTRTIPRLKN
301: TVRRNPASKQ RRGKKKNSNT SKVSKQKVRK PAPARRRRKR PVIEHYEDDD DFIVEDDQVK VNRNSRKKAR FGRQVEVDWP VPVAEADIWP AIDSDSSEFE
401: FGTSEDEPEG EPVRAAVRKG RKKRGLSGSS SDSEFHVLDK ELSDVREEEV KTKKRVRVLQ SSSDSEFHLS DKEMSDVREE VKRKKRTCVL QSSSESEFHA
501: SDKESGDIRI EETRRKKRLL VSQSSSDSEF HVSDKDARDS GEAKSLVAQP MLSVSPKRLC FTRNGGDKGK EKKELVDSGK PWCGICLSED QRMTLQGVLN
601: CCSHYFCFAC IMEWSKVESR CPLCKRRFNT ITKSSKVGLG LELKKSVIKV EERDQVYQPT EEEIRRWLDP YENLVCIECN QGGEDSLMLL CDICDSSAHT
701: YCVGLGREVP EGNWYCGGCR LSGEGSMHPR SLTNSNSAQL GTAAPISTFG RSPSINPWQT FQGFDLNVSP RDIPRQNIHA DSRASTFGAS TPTGRLATLS
801: RRRRLIHILL DRQRQPVSQD TGYDGVQHSG YAPRADPDHR NFSASSESHS LQHNDSLPRI EPNCRNFSGP WEANSSQTLL DDIRDQHSYF SSVQAQRNST
901: PCLFVDGNNF QHTESVNSNV KHTCSISPH
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.