Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G094000.1 | Wheat | nucleus | 85.14 | 85.34 |
| TraesCS2D01G092600.1 | Wheat | nucleus | 56.06 | 80.05 |
| HORVU2Hr1G015670.1 | Barley | cytosol | 32.15 | 59.76 |
| Os07t0690300-01 | Rice | nucleus | 18.5 | 43.62 |
| GSMUA_Achr11P... | Banana | nucleus | 22.37 | 35.6 |
| TraesCS4B01G186500.1 | Wheat | nucleus | 22.62 | 32.26 |
| Bra001159.1-P | Field mustard | nucleus | 12.28 | 31.8 |
| GSMUA_Achr10P... | Banana | nucleus | 13.41 | 29.28 |
| CDY14653 | Canola | nucleus | 15.27 | 28.64 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 16.48 | 27.83 |
| CDY05191 | Canola | nucleus | 17.21 | 26.2 |
| KRG92939 | Soybean | nucleus | 17.93 | 25.87 |
| AT3G05670.2 | Thale cress | nucleus | 17.93 | 25.14 |
| CDX74135 | Canola | nucleus | 17.45 | 25.12 |
| KRH33855 | Soybean | nucleus | 15.91 | 24.94 |
| Solyc01g100130.2.1 | Tomato | nucleus | 17.04 | 22.81 |
| PGSC0003DMT400063611 | Potato | nucleus | 17.04 | 22.23 |
| CDY27748 | Canola | cytosol | 6.22 | 21.57 |
| Bra039418.1-P | Field mustard | nucleus | 6.06 | 21.07 |
| TraesCS7B01G119600.1 | Wheat | nucleus | 10.02 | 13.89 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 7.51 | 7.04 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | ncoils:Coil | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| PFAM:PF00628 | PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR22937 |
| PANTHER:PTHR22937:SF77 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2B01G108800 |
| EnsemblPlants:TraesCS2B01G108800.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | TIGR:cd16574 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:69410084..69414973
Molecular Weight (calculated)
140666.0 Da
IEP (calculated)
4.149
GRAVY (calculated)
-1.284
Length
1238 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVAGGRAVLR RAKMGGDDDD DEYVVDEDEE EEVEEEDDAA VACSDEDAAE EEEEADPEPE PEDESDADFD GDAEEEEDDE DFEIDKPRQR PRRPPRPSPR
0101: PRGRGRKKAK SDDDDDSDAV SEEEDDDEDF EIDAPRPRRP AKARGRGRKR RRKQESEDES DADFEEEIET PRPKARRRAR KAKPRDDDDD SDADFDDEEE
0201: DEDFEIDTPR PRRAPTARSR GRTRVQEEES DAEFDGQDEG FEIQTGRPRR APTARSQGRA GKQEDESDEE FDGEEGESEK EEVEVEAPWP KRPATVRFRR
0301: RREEQEIESD ADFKREEEEE VENEQLEVET PQPAMDPSWG RSGEQEDESD ADFDGEEEEL ENEELEVETP LSANFRSGGR NVKEEDELDA DFNVAEEEAE
0401: DLEEDEELEI ETPESVKYRS GGRNVKEEEE LDADFNVAEE EVEDQEDDDE LEIETPESIK YRSGGRNVKE EDELDADFNV AEEEVEDQEE DEELEIETPE
0501: SVKYRPNGRN LKQEDEFDAD FNGAEEEVED QEDDEELETE TLQPRNLSEA RGKGRKVKPT GSSRQRHEDD DDYEEEIEDE DEDFDPEVDE DEEDEEEDVE
0601: EEDDDLGDYA PTLATKVRPR NHLAKRKPAA GRQHRKRKSG SKGKTRNVTS ARRRRSKRRV ADDYEDDEEE EDDDDFVVKD DVEEEVNYRP RKKAKVGRKT
0701: REGTAEPVAV GEAWPSVESD TSEFEFVTSD EDHAEKETPV AEPARIKRKK GRRKRGSESD SSSDSDYVIS EEELKDLGVP RPQETVPQLP SPPARRTIAP
0801: RRVDEKGKEP EEALKQICGI CLSEEQRATI QGVLNCCSHY FCFACILEWS KVESRCPLCK RRFNTITKSS VADLGLGLRN APVRVEKRDQ VYQPTEDEMR
0901: RWLDPYENVV CIECNQGGDD NLMLLCDICD SSAHTFCVGL GREVPEGNWY CGGCRSSVEG PSHAQIQDRV VHRGDSNMNT ADSSSGSLGR STSSGVFQRP
1001: PPINVQPSLQ GFDLNLSPIE TPEEDKRAES HLSAEPVSTP TGRHATLDRR RALNRRIRIL LFRPRTATNA WQNSIQQDRS APGTEQNQRI ACTSTDVSPS
1101: CSRADFMQSQ QSSSHFVQSA SNLNQCTDEG GSNFREVANA KDQLIPIVKK SIKHICARSP LDQSSFTNVA RRATHTILAL SGIAHNKDRV VSTPFPFPSH
1201: CCHACDGREP AFLMRTICSS CFNSFVGDVV SHIANMFS
0101: PRGRGRKKAK SDDDDDSDAV SEEEDDDEDF EIDAPRPRRP AKARGRGRKR RRKQESEDES DADFEEEIET PRPKARRRAR KAKPRDDDDD SDADFDDEEE
0201: DEDFEIDTPR PRRAPTARSR GRTRVQEEES DAEFDGQDEG FEIQTGRPRR APTARSQGRA GKQEDESDEE FDGEEGESEK EEVEVEAPWP KRPATVRFRR
0301: RREEQEIESD ADFKREEEEE VENEQLEVET PQPAMDPSWG RSGEQEDESD ADFDGEEEEL ENEELEVETP LSANFRSGGR NVKEEDELDA DFNVAEEEAE
0401: DLEEDEELEI ETPESVKYRS GGRNVKEEEE LDADFNVAEE EVEDQEDDDE LEIETPESIK YRSGGRNVKE EDELDADFNV AEEEVEDQEE DEELEIETPE
0501: SVKYRPNGRN LKQEDEFDAD FNGAEEEVED QEDDEELETE TLQPRNLSEA RGKGRKVKPT GSSRQRHEDD DDYEEEIEDE DEDFDPEVDE DEEDEEEDVE
0601: EEDDDLGDYA PTLATKVRPR NHLAKRKPAA GRQHRKRKSG SKGKTRNVTS ARRRRSKRRV ADDYEDDEEE EDDDDFVVKD DVEEEVNYRP RKKAKVGRKT
0701: REGTAEPVAV GEAWPSVESD TSEFEFVTSD EDHAEKETPV AEPARIKRKK GRRKRGSESD SSSDSDYVIS EEELKDLGVP RPQETVPQLP SPPARRTIAP
0801: RRVDEKGKEP EEALKQICGI CLSEEQRATI QGVLNCCSHY FCFACILEWS KVESRCPLCK RRFNTITKSS VADLGLGLRN APVRVEKRDQ VYQPTEDEMR
0901: RWLDPYENVV CIECNQGGDD NLMLLCDICD SSAHTFCVGL GREVPEGNWY CGGCRSSVEG PSHAQIQDRV VHRGDSNMNT ADSSSGSLGR STSSGVFQRP
1001: PPINVQPSLQ GFDLNLSPIE TPEEDKRAES HLSAEPVSTP TGRHATLDRR RALNRRIRIL LFRPRTATNA WQNSIQQDRS APGTEQNQRI ACTSTDVSPS
1101: CSRADFMQSQ QSSSHFVQSA SNLNQCTDEG GSNFREVANA KDQLIPIVKK SIKHICARSP LDQSSFTNVA RRATHTILAL SGIAHNKDRV VSTPFPFPSH
1201: CCHACDGREP AFLMRTICSS CFNSFVGDVV SHIANMFS
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.