Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56752 | Soybean | nucleus | 22.07 | 36.48 |
| PGSC0003DMT400010393 | Potato | nucleus | 35.03 | 34.92 |
| KRH03187 | Soybean | nucleus | 32.1 | 34.04 |
| Solyc06g069360.2.1 | Tomato | nucleus | 34.1 | 34.0 |
| GSMUA_Achr3P10630_001 | Banana | nucleus | 32.1 | 30.77 |
| Zm00001d045755_P001 | Maize | nucleus | 27.62 | 24.42 |
| EER88243 | Sorghum | nucleus | 28.4 | 23.71 |
| Os06t0283200-01 | Rice | nucleus | 27.62 | 23.46 |
| TraesCS7B01G119600.1 | Wheat | nucleus | 28.09 | 20.38 |
| VIT_14s0060g01560.t01 | Wine grape | nucleus | 22.69 | 20.05 |
| TraesCS7D01G214800.1 | Wheat | nucleus | 27.47 | 18.86 |
| TraesCS7A01G212900.1 | Wheat | nucleus | 27.31 | 18.71 |
| HORVU7Hr1G043160.1 | Barley | nucleus | 16.98 | 15.05 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 12.81 | 6.47 |
Protein Annotations
| EntrezGene:100266325 | wikigene:100266325 | Gene3D:3.30.40.10 | MapMan:35.2 | ProteinID:CBI15361 | ProteinID:CBI15361.3 |
| UniProt:D7SIQ0 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:IPR019787 | EntrezGene:LOC100266325 | wikigene:LOC100266325 | PFAM:PF00628 | PFAM:PF13639 |
| ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF132 | SMART:SM00184 |
| SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | TIGR:TC61652 | UniParc:UPI0001985023 | ArrayExpress:VIT_17s0000g04770 |
| EnsemblPlantsGene:VIT_17s0000g04770 | EnsemblPlants:VIT_17s0000g04770.t01 | unigene:Vvi.11532 | RefSeq:XP_002273302 | RefSeq:XP_002273302.1 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | : |
Description
No Description!
Coordinates
chr17:+:5154403..5159876
Molecular Weight (calculated)
72027.6 Da
IEP (calculated)
7.904
GRAVY (calculated)
-0.579
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEATDKSPR QRSDSAIEYR IAMSSDSETL GSDISANQCP KAKEAVDFDS NCCGICLLED DRAIRGWVDS CDHYFCFVCI MEWAKVESRC PMCKRRFSTI
101: RRPPKPGVFP SERIVNVPVR DQAYHHFGNV TTGPSDPYAE VDCGICHGTA DESFLLICDL CDSAAHTYCV GLGHTVPEGD WFCHDCTVSR AEHANGEIDA
201: VFDDRNNFRN FYRKPSAETH VSICDIVAEP YTREDERPPS IGSSHPNRPS SPIALNSENF AVNNSSSMSV ARTLLRCRNV NAHIQALREN WNALRSGSMT
301: FSSILGDSGG ESSQKYNVGA SCPKQDNNAC SYDTEKAWKM MDKAKSIQRA CERTGIIHQV SKHPLGKVNV PKEVANVKSS SATNNRQLGN KDFGWHFKHH
401: SLETDNKRYK PQKSENQEQG RVTRTGIPKF TESSLTIHSL VSFDSPSSRK AETSFQVDVH HRTGVRPSQK NLVDSFNAIN ERDGYGSLII PDGPVPRSPD
501: LSHANLKFGA SSLCKEDLLH RPKGRVEIGS AKNKARRDDD AKSEIQSLVK LNLKLISKDK QLGVDTFKEV ARLATHTILA ACGLEHSKSC VRSFPTSMCT
601: HSEQVQQLHK STLMPRSCRE CFYAYVKDVV NFITVEKMGS TGSCRVLP
101: RRPPKPGVFP SERIVNVPVR DQAYHHFGNV TTGPSDPYAE VDCGICHGTA DESFLLICDL CDSAAHTYCV GLGHTVPEGD WFCHDCTVSR AEHANGEIDA
201: VFDDRNNFRN FYRKPSAETH VSICDIVAEP YTREDERPPS IGSSHPNRPS SPIALNSENF AVNNSSSMSV ARTLLRCRNV NAHIQALREN WNALRSGSMT
301: FSSILGDSGG ESSQKYNVGA SCPKQDNNAC SYDTEKAWKM MDKAKSIQRA CERTGIIHQV SKHPLGKVNV PKEVANVKSS SATNNRQLGN KDFGWHFKHH
401: SLETDNKRYK PQKSENQEQG RVTRTGIPKF TESSLTIHSL VSFDSPSSRK AETSFQVDVH HRTGVRPSQK NLVDSFNAIN ERDGYGSLII PDGPVPRSPD
501: LSHANLKFGA SSLCKEDLLH RPKGRVEIGS AKNKARRDDD AKSEIQSLVK LNLKLISKDK QLGVDTFKEV ARLATHTILA ACGLEHSKSC VRSFPTSMCT
601: HSEQVQQLHK STLMPRSCRE CFYAYVKDVV NFITVEKMGS TGSCRVLP
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.