Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G075800.1 | Wheat | plastid | 99.33 | 99.11 |
| HORVU3Hr1G013690.6 | Barley | mitochondrion | 91.54 | 98.56 |
| TraesCS3B01G089800.1 | Wheat | plastid | 98.22 | 98.22 |
| KXG31875 | Sorghum | plastid | 80.85 | 79.78 |
| Zm00001d039852_P001 | Maize | plastid | 80.4 | 79.34 |
| Os01t0151200-01 | Rice | plasma membrane | 80.85 | 79.08 |
| Zm00001d008625_P001 | Maize | mitochondrion | 81.29 | 78.49 |
| CDY31733 | Canola | plastid | 66.82 | 67.57 |
| KRH24811 | Soybean | plastid | 67.71 | 67.56 |
| PGSC0003DMT400001063 | Potato | plastid | 67.26 | 67.41 |
| Solyc11g066110.1.1 | Tomato | plastid | 67.04 | 67.34 |
| KRH29812 | Soybean | plastid | 67.48 | 67.33 |
| Bra035669.1-P | Field mustard | plastid | 66.82 | 67.11 |
| CDX77209 | Canola | plastid | 65.7 | 66.44 |
| VIT_06s0004g04460.t01 | Wine grape | plastid | 66.37 | 65.49 |
| AT2G28800.1 | Thale cress | plastid | 65.92 | 64.07 |
| GSMUA_Achr9P03990_001 | Banana | mitochondrion, plastid | 62.36 | 63.06 |
| TraesCS4A01G341100.1 | Wheat | plastid | 52.78 | 45.66 |
| GSMUA_Achr5P28630_001 | Banana | cytosol, nucleus, plasma membrane | 64.59 | 41.43 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G075700.1 | EnsemblPlantsGene:TraesCS3A01G075700 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0032977 | InterPro:Membr_insert_YidC/Oxa1_C | InterPro:YidC/ALB3/OXA1/COX18 | PANTHER:PTHR12428 | PANTHER:PTHR12428:SF19 |
| PFAM:PF02096 | SEG:seg | TIGRFAMs:TIGR03592 | TMHMM:TMhelix | MapMan:23.1.7.5 | : |
Description
No Description!
Coordinates
chr3A:+:47036153..47039898
Molecular Weight (calculated)
47561.3 Da
IEP (calculated)
9.756
GRAVY (calculated)
-0.045
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKALLSSSL LPSLPRAVAG AGAARLPPLP SLRRRAAGCR VRASLHGLDS VGGLHAALER AEAALYTLAD AAVVAADSAA GAAGGGEDAG TAVQKSGGWF
101: GFISDAMEVV LKILKDGLSA VHVPYAYGFA IILLTIVVKA ATLPLTKQQV ESTMAMQNLQ PQLKAIQARY AGNQERIQLE TARLYKQAGV NPLAGCLPTL
201: ATIPVWIGLY QALSNVANEG LLTEGFFWIP SLGGPTTIAA RQSGAGISWL FPFVDGHPPI GWHDTICYLV LPVLLVASQF VSMEIMKPPQ STDPSQKNTQ
301: LILKFLPFMI GYFSLSVPSG LSIYWFTNNV LSTAQQIWLR KLGGAKPAMN EGASGIITAG RAKRSGAQSG QGGERFKQLK EEENRRKAVK ALGAGDSNGS
401: TTSEDEESDD DTTEEGGPVE ETFATGNDKK LPTYSGKKGK RSKRKRIVQ
101: GFISDAMEVV LKILKDGLSA VHVPYAYGFA IILLTIVVKA ATLPLTKQQV ESTMAMQNLQ PQLKAIQARY AGNQERIQLE TARLYKQAGV NPLAGCLPTL
201: ATIPVWIGLY QALSNVANEG LLTEGFFWIP SLGGPTTIAA RQSGAGISWL FPFVDGHPPI GWHDTICYLV LPVLLVASQF VSMEIMKPPQ STDPSQKNTQ
301: LILKFLPFMI GYFSLSVPSG LSIYWFTNNV LSTAQQIWLR KLGGAKPAMN EGASGIITAG RAKRSGAQSG QGGERFKQLK EEENRRKAVK ALGAGDSNGS
401: TTSEDEESDD DTTEEGGPVE ETFATGNDKK LPTYSGKKGK RSKRKRIVQ
001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
Arabidopsis Description
ALB3ALB3 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.