Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G401200.1 | Wheat | plastid | 79.4 | 81.5 |
| TraesCS6A01G416000.1 | Wheat | plastid | 76.39 | 77.39 |
| HORVU6Hr1G094410.12 | Barley | plastid | 77.25 | 66.91 |
| CDY70123 | Canola | plastid | 48.93 | 51.82 |
| CDY42217 | Canola | plastid | 48.93 | 51.58 |
| Bra038239.1-P | Field mustard | plastid | 48.5 | 51.36 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 49.79 | 51.1 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 45.92 | 50.0 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 45.92 | 50.0 |
| OQU86019 | Sorghum | plastid | 50.64 | 49.58 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 46.78 | 49.1 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 48.5 | 47.68 |
| PGSC0003DMT400082426 | Potato | plastid | 45.06 | 43.21 |
| Solyc04g009370.2.1 | Tomato | plastid | 45.06 | 43.21 |
| Os02t0829850-00 | Rice | mitochondrion | 8.15 | 24.36 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G473400.1 | EnsemblPlantsGene:TraesCS6B01G473400 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 | PANTHER:PTHR35126:SF1 |
| PFAM:PF11267 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:720559758..720560614
Molecular Weight (calculated)
26169.6 Da
IEP (calculated)
9.406
GRAVY (calculated)
-0.819
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNVLSSGNP QNLRIIHHHH QHDILLCPRR SSSSQLALIA NPPSRTRRPS SGSFRRGAVV PVRAVADGGG ESSSGKDDDD DDDQEKKRRK DDEEGTSSSS
101: ASSRRNREEL ERLVGAPGDD GFSGLDLATL IRKRYGRSYD VTLIRKEFMG RNLLAMNVMW KYREQRSFPL TEEEYLLRLD DVANTLRSWG AVAHVRNSLE
201: TTKDRPRIGK AVSIFIDVDS AGGGNRSDEW IYK
101: ASSRRNREEL ERLVGAPGDD GFSGLDLATL IRKRYGRSYD VTLIRKEFMG RNLLAMNVMW KYREQRSFPL TEEEYLLRLD DVANTLRSWG AVAHVRNSLE
201: TTKDRPRIGK AVSIFIDVDS AGGGNRSDEW IYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.