Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42217 | Canola | plastid | 100.0 | 99.55 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 83.64 | 82.88 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 59.55 | 57.71 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 55.45 | 57.01 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 54.55 | 56.07 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 58.18 | 54.01 |
| PGSC0003DMT400082426 | Potato | plastid | 55.91 | 50.62 |
| OQU86019 | Sorghum | plastid | 54.09 | 50.0 |
| Solyc04g009370.2.1 | Tomato | plastid | 55.0 | 49.79 |
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 51.36 | 48.5 |
| TraesCS6A01G416000.1 | Wheat | plastid | 50.0 | 47.83 |
| TraesCS6D01G401200.1 | Wheat | plastid | 48.18 | 46.7 |
| HORVU6Hr1G094410.12 | Barley | plastid | 50.91 | 41.64 |
| Bra022465.1-P | Field mustard | nucleus | 2.27 | 3.25 |
Protein Annotations
| EnsemblPlants:Bra038239.1 | EnsemblPlants:Bra038239.1-P | EnsemblPlantsGene:Bra038239 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 |
| PANTHER:PTHR35126:SF1 | PFAM:PF11267 | SEG:seg | UniParc:UPI0002544AC8 | UniProt:M4FAX4 | MapMan:35.2 |
Description
AT3G19900 (E=7e-097) | unknown protein
Coordinates
chrA01:+:21385046..21386932
Molecular Weight (calculated)
24974.7 Da
IEP (calculated)
8.282
GRAVY (calculated)
-0.621
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIVSSHHHC QPSFTHEQRC GIGTLSKVSY SGPCFSGRLA FSHSLCLKSS CKGETGRRRV SRICSVVDDG MNPDSSDDEE KESLDDKSKR EADDMNRANL
101: ERMVGSDDSA FNGLDLATLI RQKYGRSYDV QLIKKEFMGR NLLAMNVMWK YREQRSFPLT EEEYILRLDD VANMLKCWGA VSHIRNSLAK SKERPRIGKA
201: VSIFIDMDST GGRANEWIYK
101: ERMVGSDDSA FNGLDLATLI RQKYGRSYDV QLIKKEFMGR NLLAMNVMWK YREQRSFPLT EEEYILRLDD VANMLKCWGA VSHIRNSLAK SKERPRIGKA
201: VSIFIDMDST GGRANEWIYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.