Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25356 | Canola | cytosol | 10.39 | 6.64 |
| Os02t0829850-00 | Rice | mitochondrion | 1.3 | 2.56 |
| Bra038239.1-P | Field mustard | plastid | 3.25 | 2.27 |
Protein Annotations
| EnsemblPlants:Bra022465.1 | EnsemblPlants:Bra022465.1-P | EnsemblPlantsGene:Bra022465 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CG-1_dom |
| InterPro:IPR005559 | PFAM:PF03859 | SEG:seg | UniParc:UPI0002547CC3 | UniProt:M4E117 | MapMan:35.2 |
Description
No Description!
Coordinates
chrA05:+:17507859..17510660
Molecular Weight (calculated)
17507.8 Da
IEP (calculated)
9.835
GRAVY (calculated)
-0.853
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGANQEVPS KRLPGYCNLQ EKHGDDEEVG ALIVKSKTSW LSAEEICKIL KQAESKNLTE SVEKPPIDSI GLFIFREKKF YDHWRWNDVG GSKRKRGGNN
101: RLGKKKKKLS GNDGCSVNVM ESTGLLEDNY VRRVHRDSKN FGDELAVVHY RRLT
101: RLGKKKKKLS GNDGCSVNVM ESTGLLEDNY VRRVHRDSKN FGDELAVVHY RRLT
001: MANNLQDVID DPDLEDVLIR SRTEWLDHED LRNILGKRED LLTSTVPVPF PEEGLFLFDV DEQDVLDTTV WDLTNFNKMH GDFDIRYRVD QCFLVPINEG
101: VSSTYERRVY KCEQLYGTYR VVHYRRYHMS DDNDYGHNSG EDTEDSQNLG NSDNDSSDDD GSSNDDDGSS DDESHSSDDE SAGDDNIEAH ANGF
101: VSSTYERRVY KCEQLYGTYR VVHYRRYHMS DDNDYGHNSG EDTEDSQNLG NSDNDSSDDD GSSNDDDGSS DDESHSSDDE SAGDDNIEAH ANGF
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9LUQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.