Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038239.1-P | Field mustard | plastid | 57.71 | 59.55 |
| CDY42217 | Canola | plastid | 57.71 | 59.28 |
| CDY70123 | Canola | plastid | 57.27 | 59.09 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 54.19 | 57.48 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 53.74 | 57.01 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 55.51 | 56.76 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 55.95 | 53.59 |
| OQU86019 | Sorghum | plastid | 53.74 | 51.26 |
| PGSC0003DMT400082426 | Potato | plastid | 54.63 | 51.03 |
| Solyc04g009370.2.1 | Tomato | plastid | 54.19 | 50.62 |
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 51.1 | 49.79 |
| TraesCS6D01G401200.1 | Wheat | plastid | 49.78 | 49.78 |
| TraesCS6A01G416000.1 | Wheat | plastid | 49.78 | 49.13 |
| HORVU6Hr1G094410.12 | Barley | plastid | 49.34 | 41.64 |
| Os02t0829850-00 | Rice | mitochondrion | 9.69 | 28.21 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P14110_001 | EnsemblPlants:GSMUA_Achr3T14110_001 | EnsemblPlantsGene:GSMUA_Achr3G14110_001 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 |
| PANTHER:PTHR35126:SF1 | PFAM:PF11267 | SEG:seg | UniParc:UPI0002969437 | UniProt:M0SEH8 | MapMan:35.2 |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G14110_001]
Coordinates
chr3:+:13236189..13240168
Molecular Weight (calculated)
25625.4 Da
IEP (calculated)
6.939
GRAVY (calculated)
-0.589
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVISSHPQN LPLRVFDSSI KSRLSKIQCL GYSGTELPPG GTPSAKHQQL ISIHGRTRCS RLVIVRAVSD EAESNSDEAE SNSSDDDEKD PETKKEEVNG
101: GLSRDYLERI IGIDDSTFSG TDLATLIRKK YGRSYDVQLI KKEFMGRNLL AMNVMWKYME QRSFPLTEEE YILRLDDIAN TLKCWGAVSH IRNSLAKSKE
201: RPRIGKAVSI FIDMDETGGR SSEWIYK
101: GLSRDYLERI IGIDDSTFSG TDLATLIRKK YGRSYDVQLI KKEFMGRNLL AMNVMWKYME QRSFPLTEEE YILRLDDIAN TLKCWGAVSH IRNSLAKSKE
201: RPRIGKAVSI FIDMDETGGR SSEWIYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.