Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 66.91 | 77.25 |
| TraesCS6D01G401200.1 | Wheat | plastid | 64.68 | 76.65 |
| TraesCS6A01G416000.1 | Wheat | plastid | 60.59 | 70.87 |
| CDY70123 | Canola | plastid | 42.01 | 51.36 |
| CDY42217 | Canola | plastid | 42.01 | 51.13 |
| Bra038239.1-P | Field mustard | plastid | 41.64 | 50.91 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 39.78 | 50.0 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 39.41 | 49.53 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 41.64 | 49.34 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 40.52 | 49.1 |
| OQU86019 | Sorghum | plastid | 42.01 | 47.48 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 41.64 | 47.26 |
| PGSC0003DMT400082426 | Potato | plastid | 40.15 | 44.44 |
| Solyc04g009370.2.1 | Tomato | plastid | 40.15 | 44.44 |
| Os02t0829850-00 | Rice | mitochondrion | 7.43 | 25.64 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G094410.12 | EnsemblPlantsGene:HORVU6Hr1G094410 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 | PANTHER:PTHR35126:SF1 |
| PFAM:PF11267 | SEG:seg | UniParc:UPI000B47005E | UniProt:A0A287V966 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr6H:-:581145132..581147195
Molecular Weight (calculated)
30378.5 Da
IEP (calculated)
7.435
GRAVY (calculated)
-0.814
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNVLSSGHP QNHLRVIHHH QHDILSCPRR SSSGQLAVNP HPSITRRPSS SSFRRGAVRA VRAVADGGES SSGKDDDDDD QEEEEKRRNG DDNELQGTSS
101: SSSSRRNRED LERLVGVPDD DGFSGLDLAT LIRKRYGRSY DVTLIRKVHT PSFLSFHPSI QIQTQMRNPL EGTTDLPVHG MQEFMGRNLL AMNVMWKYRE
201: QRSFPLTEEE YLLRLDDVAN TLRSWGAVAH VRNSLETTKD RPRIGKAVSI FIDVDSAGGG KRSDEWIYK
101: SSSSRRNRED LERLVGVPDD DGFSGLDLAT LIRKRYGRSY DVTLIRKVHT PSFLSFHPSI QIQTQMRNPL EGTTDLPVHG MQEFMGRNLL AMNVMWKYRE
201: QRSFPLTEEE YLLRLDDVAN TLRSWGAVAH VRNSLETTKD RPRIGKAVSI FIDVDSAGGG KRSDEWIYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.