Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc04g009370.2.1 | Tomato | plastid | 97.94 | 97.94 |
KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 51.44 | 58.41 |
KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 51.03 | 57.94 |
CDY70123 | Canola | plastid | 51.03 | 56.36 |
Bra038239.1-P | Field mustard | plastid | 50.62 | 55.91 |
AT3G19900.1 | Thale cress | nucleus, plastid | 51.03 | 55.86 |
CDY42217 | Canola | plastid | 50.62 | 55.66 |
VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 53.91 | 55.27 |
GSMUA_Achr3P14110_001 | Banana | plastid | 51.03 | 54.63 |
OQU86019 | Sorghum | plastid | 46.91 | 47.9 |
TraesCS6D01G401200.1 | Wheat | plastid | 42.8 | 45.81 |
TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 43.21 | 45.06 |
TraesCS6A01G416000.1 | Wheat | plastid | 42.39 | 44.78 |
HORVU6Hr1G094410.12 | Barley | plastid | 44.44 | 40.15 |
Os02t0829850-00 | Rice | mitochondrion | 8.23 | 25.64 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400082426 | EnsemblPlantsGene:PGSC0003DMG400032539 | EntrezGene:102598426 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 |
PANTHER:PTHR35126:SF1 | PFAM:PF11267 | PGSC:PGSC0003DMG400032539 | RefSeq:XP_006359313.1 | SEG:seg | UniParc:UPI000296854A |
UniProt:M1D5X0 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400032539]
Coordinates
chr4:-:4945102..4951005
Molecular Weight (calculated)
27616.6 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.610
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTSSFWGL TTTNSAASTR MTSSLGTHPR ICSLGGGPEH IVKERSCKIS CFRYTDVESS WKELFPSKIQ KFNSFRHLNT RKCWSIFSAA TGDANDPDDS
101: EDSKNPPENE NESVNSEILR GNLERIVGRD DSAFSGIDLA ALIRNKYGRS YDVQLIKKEF MGKNLLALNV MWKYREQRSF PLTEEEYLLR LDDVANTLKC
201: WGAVSHIRNS LEKLKERPRI GKAVSIFIDM DESGGRANEW IYK
101: EDSKNPPENE NESVNSEILR GNLERIVGRD DSAFSGIDLA ALIRNKYGRS YDVQLIKKEF MGKNLLALNV MWKYREQRSF PLTEEEYLLR LDDVANTLKC
201: WGAVSHIRNS LEKLKERPRI GKAVSIFIDM DESGGRANEW IYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.