Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 77.39 | 76.39 |
| TraesCS6D01G401200.1 | Wheat | plastid | 72.61 | 73.57 |
| HORVU6Hr1G094410.12 | Barley | plastid | 70.87 | 60.59 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 46.96 | 50.47 |
| CDY70123 | Canola | plastid | 48.26 | 50.45 |
| CDY42217 | Canola | plastid | 48.26 | 50.23 |
| Bra038239.1-P | Field mustard | plastid | 47.83 | 50.0 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 46.52 | 50.0 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 49.13 | 49.78 |
| OQU86019 | Sorghum | plastid | 51.3 | 49.58 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 46.96 | 48.65 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 46.96 | 45.57 |
| PGSC0003DMT400082426 | Potato | plastid | 44.78 | 42.39 |
| Solyc04g009370.2.1 | Tomato | plastid | 44.35 | 41.98 |
| Os02t0829850-00 | Rice | mitochondrion | 8.26 | 24.36 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G416000.1 | EnsemblPlantsGene:TraesCS6A01G416000 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 | PANTHER:PTHR35126:SF1 |
| PFAM:PF11267 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:615432922..615433685
Molecular Weight (calculated)
26015.2 Da
IEP (calculated)
9.408
GRAVY (calculated)
-0.952
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNVLSSGHP QSLRIHRHRH HHHHDVSSCP RRSGSGHVAV NPHPSMTRRL SSSSFRRGAV RAVADDGGES SSGKDDDGDD DDQEKKRRKD DEEGTSSASS
101: RRNREELERL VGAPDDDGFS GLDLATLIRK RYGRSYDVTL IRKQFMGRSL LAMNVMWKYR EQRSFPLTEE EYLLRLDDVA NTLRSWGAVA HVRNSLETTK
201: DRPRIGKAVS IFIDVDSAGG GNRSDEWIYK
101: RRNREELERL VGAPDDDGFS GLDLATLIRK RYGRSYDVTL IRKQFMGRSL LAMNVMWKYR EQRSFPLTEE EYLLRLDDVA NTLRSWGAVA HVRNSLETTK
201: DRPRIGKAVS IFIDVDSAGG GNRSDEWIYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.