Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70123 | Canola | plastid | 84.23 | 85.0 |
| CDY42217 | Canola | plastid | 83.33 | 83.71 |
| Bra038239.1-P | Field mustard | plastid | 82.88 | 83.64 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 54.05 | 56.07 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 54.05 | 56.07 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 56.76 | 55.51 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 55.41 | 51.9 |
| PGSC0003DMT400082426 | Potato | plastid | 55.86 | 51.03 |
| Solyc04g009370.2.1 | Tomato | plastid | 55.41 | 50.62 |
| OQU86019 | Sorghum | plastid | 52.25 | 48.74 |
| TraesCS6A01G416000.1 | Wheat | plastid | 48.65 | 46.96 |
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 49.1 | 46.78 |
| TraesCS6D01G401200.1 | Wheat | plastid | 46.85 | 45.81 |
| HORVU6Hr1G094410.12 | Barley | plastid | 49.1 | 40.52 |
| Os02t0829850-00 | Rice | mitochondrion | 7.66 | 21.79 |
Protein Annotations
| Gene3D:3.30.428.40 | MapMan:35.2 | EntrezGene:821528 | ProteinID:AEE76306.1 | EMBL:AK317379 | ArrayExpress:AT3G19900 |
| EnsemblPlantsGene:AT3G19900 | RefSeq:AT3G19900 | TAIR:AT3G19900 | RefSeq:AT3G19900-TAIR-G | EnsemblPlants:AT3G19900.1 | TAIR:AT3G19900.1 |
| EMBL:AY085994 | EMBL:BT000906 | InterPro:DUF3067 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | RefSeq:NP_566650.1 | PFAM:PF11267 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR35126 | PANTHER:PTHR35126:SF1 | UniProt:Q8LDI1 | UniParc:UPI00000AC660 | SEG:seg |
Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
Coordinates
chr3:-:6922470..6925175
Molecular Weight (calculated)
25340.2 Da
IEP (calculated)
8.659
GRAVY (calculated)
-0.591
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.