Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082426 | Potato | plastid | 97.94 | 97.94 |
| KRH29223 | Soybean | cytosol, mitochondrion, nucleus | 50.62 | 57.48 |
| KRH24221 | Soybean | cytosol, mitochondrion, nucleus | 50.21 | 57.01 |
| CDY70123 | Canola | plastid | 50.62 | 55.91 |
| AT3G19900.1 | Thale cress | nucleus, plastid | 50.62 | 55.41 |
| Bra038239.1-P | Field mustard | plastid | 49.79 | 55.0 |
| CDY42217 | Canola | plastid | 49.79 | 54.75 |
| VIT_01s0010g01220.t01 | Wine grape | extracellular, vacuole | 53.09 | 54.43 |
| GSMUA_Achr3P14110_001 | Banana | plastid | 50.62 | 54.19 |
| OQU86019 | Sorghum | plastid | 46.91 | 47.9 |
| TraesCS6D01G401200.1 | Wheat | plastid | 42.8 | 45.81 |
| TraesCS6B01G473400.1 | Wheat | nucleus, plastid | 43.21 | 45.06 |
| TraesCS6A01G416000.1 | Wheat | plastid | 41.98 | 44.35 |
| HORVU6Hr1G094410.12 | Barley | plastid | 44.44 | 40.15 |
| Os02t0829850-00 | Rice | mitochondrion | 7.41 | 23.08 |
Protein Annotations
| EnsemblPlants:Solyc04g009370.2.1 | EnsemblPlantsGene:Solyc04g009370.2 | Gene3D:3.30.428.40 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DUF3067 | PANTHER:PTHR35126 | PANTHER:PTHR35126:SF1 |
| PFAM:PF11267 | SEG:seg | UniParc:UPI00027657E8 | UniProt:K4BP93 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4:-:2800746..2806524
Molecular Weight (calculated)
27583.6 Da
IEP (calculated)
8.359
GRAVY (calculated)
-0.615
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTSSFWGL TTTNSAASTR MTSSLGTHPR ICSLGGGPEH IVKERSCKIS CFRYTDVESS WKELFPSKIQ KFNSCRHLNT RKCWAVFSAA TGDANDPDDS
101: EDSKNPPENE NESVNNEILR GNLERIVGRD DSAFSGIDLA ALIRNKYGRS YDVQLIKKEF MGKNLLALNV MWKYREQRSF PLTEEEYLLR LDDVANTLKC
201: WGAVSHIRNS LEKLKERPRI GKAVSIFIDM DESGGRAKEW IYK
101: EDSKNPPENE NESVNNEILR GNLERIVGRD DSAFSGIDLA ALIRNKYGRS YDVQLIKKEF MGKNLLALNV MWKYREQRSF PLTEEEYLLR LDDVANTLKC
201: WGAVSHIRNS LEKLKERPRI GKAVSIFIDM DESGGRAKEW IYK
001: MMSIVSSHHH CQQSVIHERS GIGTISKVSC SRYCGPCFSG RLAFSHSLCL KTTYGKTDRR KFSRICSIVD DEGNLDNSDD EEKESLDDKT KRQANDMNRA
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
101: NLERMVGSDD SAFNGLDLAT LIRQKYGKSY DVQLIKKEFM GKNLLAMNVM WKYREQRSFP LTEEEYILRL DDVANMLKCW GAVSHIRSSL AKSKERPRIG
201: KAVSIFIDMD STGGRANEWI YK
Arabidopsis Description
AT3G19900 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDI1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.