Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039852_P001 | Maize | plastid | 86.88 | 88.79 |
| HORVU3Hr1G013690.6 | Barley | mitochondrion | 75.48 | 84.17 |
| TraesCS3D01G075800.1 | Wheat | plastid | 78.71 | 81.33 |
| TraesCS3A01G075700.1 | Wheat | plastid | 78.49 | 81.29 |
| TraesCS3B01G089800.1 | Wheat | plastid | 78.06 | 80.85 |
| Os01t0151200-01 | Rice | plasma membrane | 78.06 | 79.08 |
| PGSC0003DMT400001063 | Potato | plastid | 66.67 | 69.2 |
| Solyc11g066110.1.1 | Tomato | plastid | 66.24 | 68.9 |
| VIT_06s0004g04460.t01 | Wine grape | plastid | 67.31 | 68.79 |
| KRH24811 | Soybean | plastid | 65.38 | 67.56 |
| KRH29812 | Soybean | plastid | 65.38 | 67.56 |
| CDY31733 | Canola | plastid | 64.3 | 67.34 |
| Bra035669.1-P | Field mustard | plastid | 64.52 | 67.11 |
| CDX77209 | Canola | plastid | 63.44 | 66.44 |
| AT2G28800.1 | Thale cress | plastid | 63.66 | 64.07 |
| GSMUA_Achr9P03990_001 | Banana | mitochondrion, plastid | 61.08 | 63.96 |
| Zm00001d012861_P001 | Maize | plastid | 50.75 | 47.48 |
| GSMUA_Achr5P28630_001 | Banana | cytosol, nucleus, plasma membrane | 62.58 | 41.57 |
Protein Annotations
| MapMan:23.1.7.5 | UniProt:A0A1D6FEB6 | ProteinID:AQK90314.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0032977 | GO:GO:0051205 | InterPro:Membr_insert_YidC/Oxa1_C | PFAM:PF02096 | PANTHER:PTHR12428 |
| PANTHER:PTHR12428:SF19 | TIGRFAMs:TIGR03592 | TMHMM:TMhelix | UniParc:UPI0008447232 | InterPro:YidC/ALB3/OXA1/COX18 | EnsemblPlantsGene:Zm00001d008625 |
| EnsemblPlants:Zm00001d008625_P001 | EnsemblPlants:Zm00001d008625_T001 | SEG:seg | : | : | : |
Description
Inner membrane protein ALBINO3 chloroplastic
Coordinates
chr8:+:15170298..15175020
Molecular Weight (calculated)
49885.1 Da
IEP (calculated)
9.715
GRAVY (calculated)
-0.074
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKALLYSSL LPGLPRAVGS SRSAAARLLL LPPLRLRRGR RAASACAVRA GLHGLDSVGG PHLQAALERA EAALYTLADA AVAAADAAAG AGDDAGQAAA
101: AVQKNGGWFG FISEALEVVL KVLKDGLSAV HVPYSYGFAI ILLTIIVKAA TLPLTKKQVE STMAMQNLQP QLKAIQQRYA GNQERIQLET ARLYRQAGVN
201: PLAGCFPTLA TIPVWIGLYQ ALSNVANEGL LTEGFFWIPS LGGPTTIAAR QSGAGISWLF PFVDGHPPLG WYDTICYLVL PVLLVASQYV SMEIMKPPQI
301: YGLAQSDDPS QKNTLLVLKF LPFMIGYFSL SVPSGLSIYW FTNNVLSTAQ QVWLRKMGGA KPVVSEGDRR IITAGRAKRS NAQPAGERFR QLKEEESMRK
401: VNKALAAGDS NASSSTYDME DEESDDETTE EGGPVEEASS TGSDKKPPSY SGKKGKRSKR KRMVQ
101: AVQKNGGWFG FISEALEVVL KVLKDGLSAV HVPYSYGFAI ILLTIIVKAA TLPLTKKQVE STMAMQNLQP QLKAIQQRYA GNQERIQLET ARLYRQAGVN
201: PLAGCFPTLA TIPVWIGLYQ ALSNVANEGL LTEGFFWIPS LGGPTTIAAR QSGAGISWLF PFVDGHPPLG WYDTICYLVL PVLLVASQYV SMEIMKPPQI
301: YGLAQSDDPS QKNTLLVLKF LPFMIGYFSL SVPSGLSIYW FTNNVLSTAQ QVWLRKMGGA KPVVSEGDRR IITAGRAKRS NAQPAGERFR QLKEEESMRK
401: VNKALAAGDS NASSSTYDME DEESDDETTE EGGPVEEASS TGSDKKPPSY SGKKGKRSKR KRMVQ
001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV
Arabidopsis Description
ALB3ALB3 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.