Factsheet for Zm00001d012861_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37151	Sorghum	plastid	83.1	82.11
Os03t0844700-01	Rice	golgi, plastid	46.48	70.64
TraesCS5B01G533400.1	Wheat	plastid	65.59	63.55
TraesCS5D01G531600.2	Wheat	plastid	66.2	63.51
TraesCS4A01G341100.1	Wheat	plastid	64.79	62.04
HORVU5Hr1G120570.1	Barley	cytosol	62.98	59.96
GSMUA_Achr5P25520_001	Banana	plastid	56.34	52.04
Zm00001d039852_P001	Maize	plastid	47.28	51.65
Bra012507.1-P	Field mustard	plastid	51.51	51.41
CDY51594	Canola	plastid	51.11	51.0
CDX84950	Canola	plastid	50.1	50.82
Zm00001d008625_P001	Maize	mitochondrion	47.48	50.75
CDY27589	Canola	plastid	49.9	50.61
KRG97503	Soybean	plastid	54.33	50.56
AT1G24490.1	Thale cress	plastid	50.7	50.5
Bra032799.1-P	Field mustard	plastid	49.5	50.2
CDY03882	Canola	plastid	49.9	49.9
Solyc05g014050.2.1	Tomato	plastid	52.92	49.53
KRH31380	Soybean	plastid	53.92	49.36
VIT_01s0137g00220.t01	Wine grape	plastid	53.52	49.35
PGSC0003DMT400027904	Potato	plastid	52.52	49.34
Bra032798.1-P	Field mustard	nucleus	15.49	41.85
Bra040623.1-P	Field mustard	endoplasmic reticulum	13.28	34.55

Protein Annotations

EntrezGene:103625721	MapMan:23.1.7.5	UniProt:A0A1D6GDC4	ProteinID:AQK61623.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205
GO:GO:0072598	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592
UniParc:UPI0004DEC226	InterPro:YidC/ALB3/OXA1/COX18	EnsemblPlantsGene:Zm00001d012861	EnsemblPlants:Zm00001d012861_P001	EnsemblPlants:Zm00001d012861_T001	SEG:seg

Description

ALBINO3-like protein 1 chloroplastic

Coordinates

chr5:+:1269106..1283069

Molecular Weight (calculated)

53701.7 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.332

Length

497 amino acids

Sequence
(BLAST)

001: MAAPSHLHLH LPGCPQTLAL PLPSPGGFSA WPGLRSCSRS RQPRIRPVAA LGPADAGDLL GRVEAFLYTV ADAAVNAEPV AAAADTGTKE AAAGDWLSGI
101: TNSMETVLKV LKDGLSALHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA LAMRSLQPQV KAIQQRYAGD QERIQLETAR LYKLSGVDPL AGCLPTLVTI
201: PVWIGLYRAL SNVANEGLLT EGFFWIPSLA GPTTIAARQN GQGISWLFPF TDGHPPLGWS DTLAYIVLPV LLVISQYIST QVMQPPQSND PNQQGAQAVT
301: KFLPLLIGYF ALSVPSGLRL YWLTNNILST AQQVWLQKLG GAKNPVKEYI DKLSREETTT VQKNDSTVQS EPLSKHSKPQ PSQEPKPSGP QRGERFRKLK
401: EEESMRKEVM GQGKQSEQSS SESRVTDGTQ NSDVSSGDQK DQQGSHENGP VVASINGGVN HIRNEKTQNL SSEKEAADDH SPDVHKLTDR ENGNDAV

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.