Factsheet for GSMUA_Achr5P25520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012861_P001	Maize	plastid	52.04	56.34
KXG37151	Sorghum	plastid	52.04	55.67
KRG97503	Soybean	plastid	54.28	54.68
CDX84950	Canola	plastid	49.44	54.29
Bra012507.1-P	Field mustard	plastid	50.19	54.22
CDY51594	Canola	plastid	50.19	54.22
PGSC0003DMT400027904	Potato	plastid	53.16	54.06
Bra032799.1-P	Field mustard	plastid	49.07	53.88
CDY27589	Canola	plastid	48.88	53.67
VIT_01s0137g00220.t01	Wine grape	plastid	53.35	53.25
KRH31380	Soybean	plastid	53.72	53.22
CDY03882	Canola	plastid	49.07	53.12
Solyc05g014050.2.1	Tomato	plastid	52.42	53.11
AT1G24490.1	Thale cress	plastid	48.7	52.51
TraesCS5B01G533400.1	Wheat	plastid	50.0	52.44
TraesCS5D01G531600.2	Wheat	plastid	50.0	51.93
TraesCS4A01G341100.1	Wheat	plastid	50.0	51.83
Os03t0844700-01	Rice	golgi, plastid	30.86	50.76
GSMUA_Achr9P03990_001	Banana	mitochondrion, plastid	41.82	50.68
HORVU5Hr1G120570.1	Barley	cytosol	48.14	49.62
Bra032798.1-P	Field mustard	nucleus	14.87	43.48
Bra040623.1-P	Field mustard	endoplasmic reticulum	13.38	37.7
GSMUA_Achr5P28630_001	Banana	cytosol, nucleus, plasma membrane	43.49	33.43

Protein Annotations

MapMan:23.1.7.5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	GO:GO:0072598	EnsemblPlantsGene:GSMUA_Achr5G25520_001	EnsemblPlants:GSMUA_Achr5P25520_001
EnsemblPlants:GSMUA_Achr5T25520_001	UniProt:M0T1M7	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI000295F635	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:

Description

ALBINO3-like protein 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G25520_001]

Coordinates

chr5:-:26496864..26509434

Molecular Weight (calculated)

59147.9 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.025

Length

538 amino acids

Sequence
(BLAST)

001: MASVLFAELQ FLPLPSFAGR PSARPPSLLL LRHRQDRFGL LGGHPSPSLL RGSFVARVGP APYLPDFEAA EGLARELFGR VEGLVYTVAD AAVASSDAAA
101: ESSKQSGDWL SGITYYLETV LKVADSWVFF SWSAAPSVFC SFWIFCCSPT TVLETSFGST CVNLVAGQPK FFCLKSYLIL KDGLSTLHVP YSYGFAIILL
201: TVLVKAATFP LTKKQVESAL AMRSLQPQVK AIQQRYAGDQ ERIQLETARL YKLAGINPLA GCLPTLATIP IWIGLYRALS NVANEGLLTE GFFWIPSLAG
301: PTTIAARQNG SGISWLFPFV DGHPPLGWSD TFAYLVLPVL LVISQYISAQ IMQPTQGNDP SQQNAQAVTK FLPLMIGYFA LSVPSGLSLY WLTNNILSTA
401: QQIWLQKLGG ANNPVQDYIN SATRDEASER QKTPSLMQKS VSEIEMSKSS QGQQEEISDG LRRGERFKQI KEEEAWRRKQ REEEKKRMQE GAEDSSVIIM
501: QSLEATSIDS DKSVEKTDNM VKADSLSGNS CYIVVRDC

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.