Factsheet for Bra032798.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040623.1-P	Field mustard	endoplasmic reticulum	81.52	78.53
Bra032799.1-P	Field mustard	plastid	84.24	31.63
CDY27589	Canola	plastid	83.7	31.43
Bra012507.1-P	Field mustard	plastid	76.63	28.31
AT1G24490.1	Thale cress	plastid	72.28	26.65
Os03t0844700-01	Rice	golgi, plastid	44.57	25.08
KRG97503	Soybean	plastid	53.26	18.35
KRH31380	Soybean	plastid	48.91	16.57
VIT_01s0137g00220.t01	Wine grape	plastid	46.2	15.77
Zm00001d012861_P001	Maize	plastid	41.85	15.49
Solyc05g014050.2.1	Tomato	plastid	44.57	15.44
PGSC0003DMT400027904	Potato	plastid	44.02	15.31
Bra035669.1-P	Field mustard	plastid	36.41	14.99
KXG37151	Sorghum	plastid	40.76	14.91
GSMUA_Achr5P25520_001	Banana	plastid	43.48	14.87
TraesCS5D01G531600.2	Wheat	plastid	41.85	14.86
TraesCS4A01G341100.1	Wheat	plastid	41.85	14.84
TraesCS5B01G533400.1	Wheat	plastid	41.3	14.81
HORVU5Hr1G120570.1	Barley	cytosol	41.85	14.75

Protein Annotations

MapMan:23.1.7.5	EnsemblPlantsGene:Bra032798	EnsemblPlants:Bra032798.1	EnsemblPlants:Bra032798.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	UniProt:M4EVG5
PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TMHMM:TMhelix	UniParc:UPI0002542607	InterPro:YidC/ALB3/OXA1/COX18
SEG:seg	:	:	:	:	:

Description

AT1G24490 (E=5e-057) ALB4, ARTEMIS | ALB4 (ALBINA 4)

Coordinates

chrA09:+:12715813..12716544

Molecular Weight (calculated)

20226.7 Da

IEP (calculated)

5.440

GRAVY (calculated)

-0.818

Length

184 amino acids

Sequence
(BLAST)

001: MDPLSSIEID GVPISQSDDP TMKSSQAVTK FLPLMIGYFA LSVPSGLSLY WLTNNILSTA QQVWLQKYGG AKNPMEKLTN LVTKEDKTQK VDKSISQLVQ
101: KSVSELKIPR DKGSEKVSSE GPKPGERFRL LKEQEAKRRR EKEEERQKAE AALSNQNTDS AQEHEGKSDT GAEETGDGSA AVNG

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.