Factsheet for Os03t0844700-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
YLoc:	golgi

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37151	Sorghum	plastid	74.62	48.51
TraesCS5B01G533400.1	Wheat	plastid	73.09	46.59
Zm00001d012861_P001	Maize	plastid	70.64	46.48
TraesCS5D01G531600.2	Wheat	plastid	72.78	45.95
TraesCS4A01G341100.1	Wheat	plastid	71.87	45.28
HORVU5Hr1G120570.1	Barley	cytosol	71.25	44.64
Bra032798.1-P	Field mustard	nucleus	25.08	44.57
Bra040623.1-P	Field mustard	endoplasmic reticulum	21.71	37.17
CDY51594	Canola	plastid	49.85	32.73
CDX84950	Canola	plastid	48.93	32.65
CDY27589	Canola	plastid	48.93	32.65
Bra012507.1-P	Field mustard	plastid	49.54	32.53
Bra032799.1-P	Field mustard	plastid	48.62	32.45
Os01t0151200-01	Rice	plasma membrane	45.26	32.24
CDY03882	Canola	plastid	48.93	32.19
AT1G24490.1	Thale cress	plastid	48.93	32.06
KRH31380	Soybean	plastid	51.38	30.94
KRG97503	Soybean	plastid	50.46	30.9
GSMUA_Achr5P25520_001	Banana	plastid	50.76	30.86
VIT_01s0137g00220.t01	Wine grape	plastid	50.46	30.61
Solyc05g014050.2.1	Tomato	plastid	48.93	30.13
PGSC0003DMT400027904	Potato	plastid	48.32	29.87

Protein Annotations

MapMan:23.1.7.5	UniProt:A0A0P0W5Y9	ProteinID:BAS87331.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205
GO:GO:0072598	InterPro:Membr_insert_YidC/Oxa1_C	EnsemblPlantsGene:Os03g0844700	EnsemblPlants:Os03t0844700-01	PFAM:PF02096	PANTHER:PTHR12428
PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592	UniParc:UPI0003938F31	InterPro:YidC/ALB3/OXA1/COX18	:	:

Description

Similar to ALBINO3-like protein 1, chloroplastic. (Os03t0844700-01)

Coordinates

chr3:+:35514006..35517366

Molecular Weight (calculated)

35573.7 Da

IEP (calculated)

4.532

GRAVY (calculated)

-0.455

Length

327 amino acids

Sequence
(BLAST)

001: LYKLSDVDPL AGCLPTLVTI PVWIGLYRAL SNVANEGLLT EGFFWIPSLA GPTTIAARQS GQGISWLFPF TDGHPPLGWS DTLAYLVLPV LLVISQYVSS
101: QVMQPPQNND PSQQGAQAVV KFLPLLIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKLG GAKNPVKEYI DKLAKEESTN LGKPEPAIKS DPLPKVGKPP
201: ASQEPEPSGP QRGERFRKLK EEESRRKVFL EKAEQTEQAG TQAGIVDGKQ NSDASGDNID EQESHENEPI IANGNGGLSH STNEMIPNGS MKEDIIQEST
301: DSHSSVIDPT SHDAHKSRDE ENEQDAV

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.