Factsheet for Bra012507.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51594	Canola	plastid	97.99	97.99
Bra032799.1-P	Field mustard	plastid	78.71	80.0
AT1G24490.1	Thale cress	plastid	77.11	76.95
Bra032798.1-P	Field mustard	nucleus	28.31	76.63
Bra040623.1-P	Field mustard	endoplasmic reticulum	26.71	69.63
KRG97503	Soybean	plastid	60.04	55.99
KRH31380	Soybean	plastid	57.83	53.04
PGSC0003DMT400027904	Potato	plastid	55.82	52.55
Solyc05g014050.2.1	Tomato	plastid	55.42	51.98
Zm00001d012861_P001	Maize	plastid	51.41	51.51
Bra035669.1-P	Field mustard	plastid	46.18	51.45
VIT_01s0137g00220.t01	Wine grape	plastid	55.62	51.39
KXG37151	Sorghum	plastid	51.81	51.29
GSMUA_Achr5P25520_001	Banana	plastid	54.22	50.19
Os03t0844700-01	Rice	golgi, plastid	32.53	49.54
TraesCS4A01G341100.1	Wheat	plastid	51.0	48.94
TraesCS5B01G533400.1	Wheat	plastid	50.4	48.93
TraesCS5D01G531600.2	Wheat	plastid	50.0	48.07
HORVU5Hr1G120570.1	Barley	cytosol	48.39	46.17

Protein Annotations

MapMan:23.1.7.5	EnsemblPlantsGene:Bra012507	EnsemblPlants:Bra012507.1	EnsemblPlants:Bra012507.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	UniProt:M4D7P7
InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592	TMHMM:TMhelix
UniParc:UPI0002541230	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:	:	:

Description

AT1G24490 (E=5e-198) ALB4, ARTEMIS | ALB4 (ALBINA 4)

Coordinates

chrA07:+:7119882..7122467

Molecular Weight (calculated)

54406.1 Da

IEP (calculated)

9.241

GRAVY (calculated)

-0.231

Length

498 amino acids

Sequence
(BLAST)

001: MASAISLRPT SLILSSSFST GRVLHFRRFP FSHRPPSSSS SRRRTLVAQF GLGPGSFPDP GFSLDLIKDH AESLLYTIAD AAVSSSETFE SVSGTTTKQN
101: SDWFSGIANY METILKVLKD GLSTVHVPYS YGFAIILLTV LVKAATFPLT KKQVESAMAM KSLQPQIKAI QERYAGDQER IQLETARLYK LAGINPLAGC
201: LPTLATIPVW IGLYRALSNV ADEGLLTEGF FWIPSLAGPT TVAARQSGSG ISWLFPFIEG HPPLGWSDTL AYLVLPLLLI FSQYLSIQIM QSSQPQSNDP
301: AMKSSQAVTK LLPLMIGYFA LSVPSGLSLY WLTNNILSTA QQVWLQKYGG AKNPMEKLTN LVMKEDKTQK VEKSISEPLV KKSVSELKVP KEKGGEKVTS
401: EGPKPGERFR LLKEQEAKRR REKEEARQKA EAALSNQNIG SVQEQEDKSD TADVAVGNNE RAKLSAVGET ADGSVAVNGK PSIHGVGHDT EQHHSHEE

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.