CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97503	Soybean	plastid	85.64	87.08
Bra012507.1-P	Field mustard	plastid	53.04	57.83
CDY51594	Canola	plastid	52.67	57.43
CDY03882	Canola	plastid	52.49	57.34
AT1G24490.1	Thale cress	plastid	52.49	57.11
VIT_01s0137g00220.t01	Wine grape	plastid	56.35	56.77
Bra032799.1-P	Field mustard	plastid	50.83	56.33
CDX84950	Canola	plastid	50.83	56.33
CDY27589	Canola	plastid	50.83	56.33
PGSC0003DMT400027904	Potato	plastid	53.22	54.63
KXG37151	Sorghum	plastid	50.28	54.27
Solyc05g014050.2.1	Tomato	plastid	53.04	54.24
Zm00001d012861_P001	Maize	plastid	49.36	53.92
GSMUA_Achr5P25520_001	Banana	plastid	53.22	53.72
Os03t0844700-01	Rice	golgi, plastid	30.94	51.38
KRH24811	Soybean	plastid	42.36	51.11
KRH29812	Soybean	plastid	41.8	50.44
TraesCS5B01G533400.1	Wheat	plastid	46.78	49.51
Bra032798.1-P	Field mustard	nucleus	16.57	48.91
TraesCS5D01G531600.2	Wheat	plastid	46.59	48.84
TraesCS4A01G341100.1	Wheat	plastid	46.41	48.55
HORVU5Hr1G120570.1	Barley	cytosol	45.86	47.7
Bra040623.1-P	Field mustard	endoplasmic reticulum	14.73	41.88

Protein Annotations

EntrezGene:100815190	MapMan:23.1.7.5	EMBL:ACUP02007144	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G245300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	UniProt:I1LNE2
EnsemblPlants:KRH31380	ProteinID:KRH31380	ProteinID:KRH31380.1	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428
PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI000233D860	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:33886628..33892831

Molecular Weight (calculated)

59359.4 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.311

Length

543 amino acids

Sequence
(BLAST)

001: MAALLPCAPN IVYGPLLGNR STSHLPHRPH SHAFSGSTTR HFLRGSLTVA RFGFKPDFLP EPDEAEGVLR ELFGRAEGLL YTIADAAVSS SSSSSSDTVA
101: ASYAAKQSND WLSGIANYME TVLKVLKDGL SALHVPYAYG FAIILLTVLV KAATFPLTKK QVESSLAMRT LQPQVKAIQQ RYAGDQERIQ LETARLYKLA
201: NINPLAGCLP TLATIPVWIG LYRALSSVAD EGLLTEGFFW IPSLAGPTTV AARQNGSGIS WLFPFVDGHP PLGWSDTLAY LVLPVLLVVS QYISVQIMQS
301: SQPNDPNMKS SQALTNFLPL MIGYFALSVP SGLSLYWLTN NILSTAQQVW LQKLGGAKNP VRQVPDDIMK NDLTQVQKSM SKLNSTTAEE ARLSEKTSEG
401: PQPGERFKLI KEQEARRKQQ REEEEEKRKA LEAAARETKV DKTLEETVEV ENQTGGDLVV EKSRSLASDT DPSISGVVNG NPLSKDLEGN QNSTSTSETE
501: NNEGSAHFNN VEINEKILDK EPREVLTTTT TTNKQPPAEE TKD

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.