CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27589	Canola	plastid	95.71	95.71
CDY03882	Canola	plastid	81.43	80.28
CDY51594	Canola	plastid	81.22	79.92
AT1G24490.1	Thale cress	plastid	76.94	75.55
KRG97503	Soybean	plastid	57.96	53.18
CDX77209	Canola	plastid	47.14	52.03
CDY31733	Canola	plastid	46.94	51.8
VIT_01s0137g00220.t01	Wine grape	plastid	56.73	51.58
KRH31380	Soybean	plastid	56.33	50.83
Solyc05g014050.2.1	Tomato	plastid	54.69	50.47
Zm00001d012861_P001	Maize	plastid	50.82	50.1
PGSC0003DMT400027904	Potato	plastid	54.08	50.09
KXG37151	Sorghum	plastid	50.82	49.5
GSMUA_Achr5P25520_001	Banana	plastid	54.29	49.44
Os03t0844700-01	Rice	golgi, plastid	32.65	48.93
TraesCS5B01G533400.1	Wheat	plastid	48.98	46.78
TraesCS5D01G531600.2	Wheat	plastid	49.18	46.53
TraesCS4A01G341100.1	Wheat	plastid	49.18	46.44
HORVU5Hr1G120570.1	Barley	cytosol	47.55	44.64

Protein Annotations

MapMan:23.1.7.5	GO:A0A078D754	EnsemblPlants:CDX84950	ProteinID:CDX84950	ProteinID:CDX84950.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0032977
EnsemblPlantsGene:GSBRNA2T00142320001	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592
TMHMM:TMhelix	UniParc:UPI0004EF1865	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:	:

Description

BnaC05g21050D

Coordinates

chrLK031839:+:616461..619500

Molecular Weight (calculated)

53746.0 Da

IEP (calculated)

8.346

GRAVY (calculated)

-0.286

Length

490 amino acids

Sequence
(BLAST)

001: MASSISLKPT NLLLSSFSTG EVLHLRRSRF SHRPSSSSSY RRILVAQFGF SPGPVSLDLV KEHVESLLYT IADAAVSSSE TFDSVSGTTT TTTTNQNSDW
101: FTGIANYMET ILKVLKDGLS TVNVPYSYGF AIILLTVLVK AATFPLTKKQ VESTMAMKSL QPQIKAIQER YAGDQEKIQL ETARLYKLAG INPFAGCLPT
201: LATIPVWIGL YRALSNVADE GLLTEGFFWI PSLAGPTTVA ARQSGSGISW LFPFIEGHPP LGWSDTLAYL VLPLLLIFSQ YLSIQIMQSS QPQSDDPAMK
301: SSQAVTKFLP LMIGYFALSV PSGLSLYWLT NNILSTAQQV WLQKYGGAKN PMEKFTNLVT KEDKTQKVDK SISQPPVQKS VSELKIPRKK DGEKVTSEGP
401: KPGERFRLLK EQEAKRRREK EEERQKAEAA LSNQNTDSAQ ELEGKSDTAA EETADGSVAV NGKASIQKDE TTNGKLGVGH DAEQHHSHES

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.