CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31380	Soybean	plastid	87.08	85.64
Bra012507.1-P	Field mustard	plastid	55.99	60.04
CDY03882	Canola	plastid	55.43	59.56
CDY51594	Canola	plastid	55.43	59.44
Bra032799.1-P	Field mustard	plastid	53.56	58.37
CDY27589	Canola	plastid	53.37	58.16
CDX84950	Canola	plastid	53.18	57.96
AT1G24490.1	Thale cress	plastid	54.12	57.92
VIT_01s0137g00220.t01	Wine grape	plastid	58.24	57.7
KXG37151	Sorghum	plastid	51.31	54.47
Zm00001d012861_P001	Maize	plastid	50.56	54.33
GSMUA_Achr5P25520_001	Banana	plastid	54.68	54.28
Solyc05g014050.2.1	Tomato	plastid	53.56	53.86
PGSC0003DMT400027904	Potato	plastid	52.81	53.31
Bra032798.1-P	Field mustard	nucleus	18.35	53.26
Os03t0844700-01	Rice	golgi, plastid	30.9	50.46
KRH24811	Soybean	plastid	42.51	50.44
TraesCS5D01G531600.2	Wheat	plastid	48.31	49.81
KRH29812	Soybean	plastid	41.95	49.78
TraesCS5B01G533400.1	Wheat	plastid	47.75	49.71
TraesCS4A01G341100.1	Wheat	plastid	47.75	49.13
HORVU5Hr1G120570.1	Barley	cytosol	46.82	47.89
Bra040623.1-P	Field mustard	endoplasmic reticulum	16.48	46.07

Protein Annotations

EntrezGene:100802546	MapMan:23.1.7.5	EMBL:ACUP02010799	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G011900	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	UniProt:I1MYL3
EnsemblPlants:KRG97503	ProteinID:KRG97503	ProteinID:KRG97503.1	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428
PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI000233DFE2	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:831976..837638

Molecular Weight (calculated)

58309.3 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.285

Length

534 amino acids

Sequence
(BLAST)

001: MAALLPCAPN VVSAPLGNRS TCHFPHRPYS HAFSGSTARH FLRGSLTVAR FGFQPGFLPE PDEAEGVLRE LFGRAEGLLY TIADAAVSSS DTVAASTTAK
101: QSNDWLSGIA NYMETVLKVL KDGLSALHVP YAYGFAIILL TVLVKAATFP LTKKQVESAL AMRTLQPQVK AIQQQYAGDQ ERIQLETARL YKLANINPLA
201: GCLPTLATIP VWIGLYRALS NVADEGLLTE GFFWIPSLAG PTTVAARQNG SGISWIFPFV DGHPPLGWSD TLAYLVLPVL LIVSQYISVQ IMQSSQPNDP
301: NMKSSQALTK VLPLMIGYFA LSVPSGLSLY WLTNNILSTA QQVWLQKLGG AKNPVRQVPD DIMKNDLTQV QKSISKLNST KAEEARQSEK TSEGPQPGER
401: FKLIKEQEAR RRQRKEEERK ALEAAARKAK IDETFEKTVE EGNQTGGDLV VEKSRFVASD TDPSISGVVN GNPLSKDLEG NQNSTSISET ENNDGSAHFN
501: NVEINEKNLD KEPREVLTTT TATNKQPPAE ETKD

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.