Factsheet for HORVU5Hr1G120570.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G531600.2	Wheat	plastid	80.08	80.69
TraesCS5B01G533400.1	Wheat	plastid	78.93	80.31
TraesCS4A01G341100.1	Wheat	plastid	77.39	77.84
Os03t0844700-01	Rice	golgi, plastid	44.64	71.25
KXG37151	Sorghum	plastid	63.22	65.61
Zm00001d012861_P001	Maize	plastid	59.96	62.98
HORVU3Hr1G013690.6	Barley	mitochondrion	43.87	54.92
CDY51594	Canola	plastid	46.36	48.59
Bra012507.1-P	Field mustard	plastid	46.17	48.39
AT1G24490.1	Thale cress	plastid	46.17	48.3
GSMUA_Achr5P25520_001	Banana	plastid	49.62	48.14
CDY03882	Canola	plastid	45.4	47.69
CDY27589	Canola	plastid	44.64	47.55
CDX84950	Canola	plastid	44.64	47.55
Bra032799.1-P	Field mustard	plastid	44.44	47.35
KRG97503	Soybean	plastid	47.89	46.82
VIT_01s0137g00220.t01	Wine grape	plastid	48.28	46.75
Solyc05g014050.2.1	Tomato	plastid	47.51	46.7
PGSC0003DMT400027904	Potato	plastid	47.32	46.69
KRH31380	Soybean	plastid	47.7	45.86
Bra032798.1-P	Field mustard	nucleus	14.75	41.85
Bra040623.1-P	Field mustard	endoplasmic reticulum	12.07	32.98

Protein Annotations

MapMan:23.1.7.5	UniProt:A0A287SYH4	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	GO:GO:0072598
EnsemblPlantsGene:HORVU5Hr1G120570	EnsemblPlants:HORVU5Hr1G120570.1	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	UniParc:UPI000B48714F	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:657852835..657862864

Molecular Weight (calculated)

50425.3 Da

IEP (calculated)

4.805

GRAVY (calculated)

-0.281

Length

522 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXLPRPVAAL GWGGGGIEDV GQLLGRVEAF LYTVADAAVA AAPAAEGGAK
101: DAAAASGDWF AGITSSMETV LKVLKDGLST LHVPYPYGFA IILLTVLIKG ATFPLTKKQV ESALAMRSLQ PQVKAIQERH AGDQERIQLE TAHLYKLSGV
201: DPLAGCLPTL VTIPVWIGLY KALSNVANEG LLTEGFFWIP SLAGPTTIAA RESGQGISWI FPFTDGHPPL GWPDTLAYLV LPVLLVISQY VSAQIMQSSQ
301: SNDPSQQGAQ AAVKFLPLLI GYFALSVPSG LSLYWLTNNV LSSAQQVWLQ KLGGAKNPVQ EYIDKLGREE STNVGKHEPA DKREALPKAG KPQPGQVPKP
401: SEPQRGGRFK KLMEQESRRK QLLEQTKQTE ESSIAIDEEH NFDGFAPDSK DEQGESHENE PISASSNGGL SHDTHEATPN RSTEEGTIQE ATYTDSHSSV
501: SNAASPTDDR LRGQDEDGKD AE

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.