CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012861_P001	Maize	plastid	82.11	83.1
Os03t0844700-01	Rice	golgi, plastid	48.51	74.62
TraesCS5D01G531600.2	Wheat	plastid	67.99	66.02
TraesCS5B01G533400.1	Wheat	plastid	67.2	65.89
TraesCS4A01G341100.1	Wheat	plastid	66.2	64.16
HORVU5Hr1G120570.1	Barley	cytosol	65.61	63.22
GSMUA_Achr5P25520_001	Banana	plastid	55.67	52.04
Bra012507.1-P	Field mustard	plastid	51.29	51.81
KXG31875	Sorghum	plastid	46.72	51.65
CDY51594	Canola	plastid	50.89	51.41
KRG97503	Soybean	plastid	54.47	51.31
CDY03882	Canola	plastid	50.3	50.91
PGSC0003DMT400027904	Potato	plastid	53.48	50.85
Solyc05g014050.2.1	Tomato	plastid	53.68	50.85
CDY27589	Canola	plastid	49.5	50.82
CDX84950	Canola	plastid	49.5	50.82
Bra032799.1-P	Field mustard	plastid	49.3	50.61
AT1G24490.1	Thale cress	plastid	49.9	50.3
VIT_01s0137g00220.t01	Wine grape	plastid	53.88	50.28
KRH31380	Soybean	plastid	54.27	50.28
Bra032798.1-P	Field mustard	nucleus	14.91	40.76
Bra040623.1-P	Field mustard	endoplasmic reticulum	13.72	36.13

Protein Annotations

MapMan:23.1.7.5	UniProt:A0A1B6QGV0	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	GO:GO:0072598
EnsemblPlants:KXG37151	ProteinID:KXG37151	ProteinID:KXG37151.1	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428
PANTHER:PTHR12428:SF19	EnsemblPlantsGene:SORBI_3001G015500	TIGRFAMs:TIGR03592	UniParc:UPI00081AE7F7	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:1372290..1381195

Molecular Weight (calculated)

54390.7 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.305

Length

503 amino acids

Sequence
(BLAST)

001: MAAPCHLHLH LHLPGCPQTL ALPLPSPRGF SARPGLRSRS RLRLRPVAAL GPADAGDLLG RVEAFLYTVA DAAVSAADPV VTAADGGTKE AAGDWLSGIT
101: NSMETVLKVL KDGLSALHVP YSYGFAIILL TVLVKAATFP LTKKQVESAL AMRSLQPQVK AIQERYAGDQ ERIQLETARL YKLSGVDPLA GCLPTLVTIP
201: VWIGLYRALS NVANEGLLTE GFFWIPSLAG PTTIAARQNG QGISWLFPFT DGHPPLGWSD TLAYLVLPVL LVISQYISTQ VMQPPQSNDP SQQGAQAVTK
301: FLPLLIGYFA LSVPSGLGLY WLTNNILSTA QQVWLQKLGG AKNPVKEYID VLSREESTTV QKNESTVQIE PLPKLSKPQP SQEPKPSGPQ RGERFRKLKE
401: EESRRKEVLG QAKQSEQSSS ESSFLDETQN SDMSSGDKKD QQESHENGPI VTNSNGGVNH SRNEKAQNLS SEKEAADDHS SVSKPVSPDA RKLTDQENGN
501: DAV

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.