CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032799.1-P	Field mustard	plastid	97.55	97.55
CDX84950	Canola	plastid	95.71	95.71
Bra040623.1-P	Field mustard	endoplasmic reticulum	37.14	95.29
Bra032798.1-P	Field mustard	nucleus	31.43	83.7
CDY51594	Canola	plastid	81.02	79.72
CDY03882	Canola	plastid	80.61	79.48
AT1G24490.1	Thale cress	plastid	76.33	74.95
KRG97503	Soybean	plastid	58.16	53.37
CDX77209	Canola	plastid	47.35	52.25
CDY31733	Canola	plastid	47.14	52.03
VIT_01s0137g00220.t01	Wine grape	plastid	56.73	51.58
Solyc05g014050.2.1	Tomato	plastid	55.1	50.85
KRH31380	Soybean	plastid	56.33	50.83
PGSC0003DMT400027904	Potato	plastid	54.49	50.47
Zm00001d012861_P001	Maize	plastid	50.61	49.9
KXG37151	Sorghum	plastid	50.82	49.5
Os03t0844700-01	Rice	golgi, plastid	32.65	48.93
GSMUA_Achr5P25520_001	Banana	plastid	53.67	48.88
TraesCS4A01G341100.1	Wheat	plastid	49.59	46.82
TraesCS5B01G533400.1	Wheat	plastid	48.98	46.78
TraesCS5D01G531600.2	Wheat	plastid	48.98	46.33
HORVU5Hr1G120570.1	Barley	cytosol	47.55	44.64

Protein Annotations

MapMan:23.1.7.5	GO:A0A078GQW9	UniProt:A0A078GQW9	EnsemblPlants:CDY27589	ProteinID:CDY27589	ProteinID:CDY27589.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977
GO:GO:0051205	EnsemblPlantsGene:GSBRNA2T00038329001	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI0004EEBEFD	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:

Description

BnaA09g28180DBnaA09g28180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQW9]

Coordinates

chrLK032207:-:185568..188607

Molecular Weight (calculated)

53700.0 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.311

Length

490 amino acids

Sequence
(BLAST)

001: MATSISLKPT NLLLSSFSTG KVLHLRRSRF SHRPSPSSSC RRTLVAQFGF SPGPVSLDLI KEHVESLLYT IADAAVSSSE TFDSFSGTTT TTTTNQNSDW
101: FTGIANYMET ILKVLKDGLS TVNVPYSYGF AIILLTVLVK AATFPLTKKQ VESTMAMKSL QPQIKAIQER YAGDQEKIQL ETARLYKLAG INPFAGCLPT
201: LATIPVWIGL YRALSNVADE GLLTEGFFWI PSLAGPTTVA ARQSGSGISW LFPFIEGHPP LGWSDTLAYL VLPLLLIFSQ YLSIQIMQSS QPQSDDPAMK
301: SSQAVTKFLP LMIGYFALSV PSGLSLYWLT NNILSTAQQV WLQKYGGAKN PMEKLTNLVT KEDKTQKVDK SISQPLVQKS VSELKIPRDK GSEKVTSEGP
401: KPGERFRLLK EQEAKRRREK EEERQKAEAA LSNQNTDSAE EHEGKSDTGA EETGDGSAAV NGKPSIQKDE TTNGKLGVGH DAEKQHSHET

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.