Factsheet for Bra040623.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032798.1-P	Field mustard	nucleus	78.53	81.52
Bra032799.1-P	Field mustard	plastid	96.34	37.55
CDY27589	Canola	plastid	95.29	37.14
Bra012507.1-P	Field mustard	plastid	69.63	26.71
AT1G24490.1	Thale cress	plastid	64.4	24.65
Os03t0844700-01	Rice	golgi, plastid	37.17	21.71
KRG97503	Soybean	plastid	46.07	16.48
KRH31380	Soybean	plastid	41.88	14.73
VIT_01s0137g00220.t01	Wine grape	plastid	40.84	14.47
Solyc05g014050.2.1	Tomato	plastid	39.79	14.31
PGSC0003DMT400027904	Potato	plastid	38.22	13.8
KXG37151	Sorghum	plastid	36.13	13.72
GSMUA_Achr5P25520_001	Banana	plastid	37.7	13.38
Zm00001d012861_P001	Maize	plastid	34.55	13.28
Bra035669.1-P	Field mustard	plastid	30.37	12.98
TraesCS4A01G341100.1	Wheat	plastid	33.51	12.33
TraesCS5B01G533400.1	Wheat	plastid	32.98	12.28
TraesCS5D01G531600.2	Wheat	plastid	32.98	12.16
HORVU5Hr1G120570.1	Barley	cytosol	32.98	12.07

Protein Annotations

MapMan:23.1.7.5	EnsemblPlantsGene:Bra040623	EnsemblPlants:Bra040623.1	EnsemblPlants:Bra040623.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977	GO:GO:0051205	UniProt:M4FHP5
PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TMHMM:TMhelix	UniParc:UPI000253E6EA	InterPro:YidC/ALB3/OXA1/COX18
SEG:seg	:	:	:	:	:

Description

AT1G24490 (E=1e-054) ALB4, ARTEMIS | ALB4 (ALBINA 4)

Coordinates

chrScaffold000225:-:64990..65742

Molecular Weight (calculated)

21154.8 Da

IEP (calculated)

8.824

GRAVY (calculated)

-1.006

Length

191 amino acids

Sequence
(BLAST)

001: MKSSQAVTKF LPLMIGYFAL SVPSGLSLYW LTNNILSTAQ QVWLQKYGGA KNPMEKLTNL VTKEDKTQKV DKSISQLVQK SVSELKIPRD KGSEKVTSEG
101: PKPGERFRLL KEQEAKRRRE KEEERQKAEA ALSNQNTDSA QEHEGKSDTG AEETGDGSAA VNGKPSIQKD ETTNDKLGVG HDAEKQHSHE T

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.