Factsheet for TraesCS5B01G533400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G531600.2	Wheat	plastid	89.08	88.22
TraesCS4A01G341100.1	Wheat	plastid	84.21	83.24
HORVU5Hr1G120570.1	Barley	cytosol	80.31	78.93
Os03t0844700-01	Rice	golgi, plastid	46.59	73.09
KXG37151	Sorghum	plastid	65.89	67.2
Zm00001d012861_P001	Maize	plastid	63.55	65.59
TraesCS3B01G089800.1	Wheat	plastid	44.64	51.0
Bra012507.1-P	Field mustard	plastid	48.93	50.4
CDY51594	Canola	plastid	48.54	50.0
GSMUA_Achr5P25520_001	Banana	plastid	52.44	50.0
CDY03882	Canola	plastid	47.76	49.3
CDY27589	Canola	plastid	46.78	48.98
CDX84950	Canola	plastid	46.78	48.98
Bra032799.1-P	Field mustard	plastid	46.78	48.98
AT1G24490.1	Thale cress	plastid	47.56	48.9
PGSC0003DMT400027904	Potato	plastid	49.9	48.39
Solyc05g014050.2.1	Tomato	plastid	49.71	48.02
KRG97503	Soybean	plastid	49.71	47.75
VIT_01s0137g00220.t01	Wine grape	plastid	49.51	47.12
KRH31380	Soybean	plastid	49.51	46.78
Bra032798.1-P	Field mustard	nucleus	14.81	41.3
Bra040623.1-P	Field mustard	endoplasmic reticulum	12.28	32.98

Protein Annotations

MapMan:23.1.7.5	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0032977	GO:GO:0072598	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	EnsemblPlantsGene:TraesCS5B01G533400	EnsemblPlants:TraesCS5B01G533400.1	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:690221470..690228981

Molecular Weight (calculated)

55069.2 Da

IEP (calculated)

5.348

GRAVY (calculated)

-0.307

Length

513 amino acids

Sequence
(BLAST)

001: MAAPSLHLLL PRHPQALPPP PPRASPSMLA LPRFPLPARR RGRAVAALGW GGGGGIEDVG QLFSRVEAFL YTVADAAVAA APAAEGGAKE AAAAGDWFAG
101: ITGSMETVLK VLKDGLSTLH VPYPYGFAII LLTVLIKGAT FPLTKKQVES ALAMRSLQPQ VKAIQERHAG DQERIQLETA HLYKLSGVDP LAGCLPTLVT
201: IPVWIGLYKA LSNVANEGLL TEGFFWIPSL ASPTTIAARE SGQGISWLFP FTDGHPPLGW SDTMAYLVLP ILLVISQYVS AQIMQSSQSN DPSQQGAQAA
301: VKFLPLLIGY FALSVPSGLS LYWLTNNVLS SAQQVWLQKL GGAKNPVQEY IDKLAREEST NVGKYEPADK SEVLPKAGKP QPGQVPKPSE PQRGGRFKKL
401: MEEESRRKQL VEQAKQTDEA STDSFAIDGK QNFDSSAPDT KDEQEESHEN EPISASSNGG LSHDTHEATP KRNMEEGTIQ EATNTDSHSS VSNAASPSDD
501: RLRGQDEDGK DAE

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.