CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012507.1-P	Field mustard	plastid	97.99	97.99
CDY03882	Canola	plastid	92.17	92.35
CDX84950	Canola	plastid	79.92	81.22
CDY27589	Canola	plastid	79.72	81.02
AT1G24490.1	Thale cress	plastid	77.11	76.95
KRG97503	Soybean	plastid	59.44	55.43
KRH31380	Soybean	plastid	57.43	52.67
CDX77209	Canola	plastid	46.79	52.48
PGSC0003DMT400027904	Potato	plastid	55.62	52.36
CDY31733	Canola	plastid	46.59	52.25
Solyc05g014050.2.1	Tomato	plastid	55.22	51.79
VIT_01s0137g00220.t01	Wine grape	plastid	56.02	51.76
Zm00001d012861_P001	Maize	plastid	51.0	51.11
KXG37151	Sorghum	plastid	51.41	50.89
GSMUA_Achr5P25520_001	Banana	plastid	54.22	50.19
Os03t0844700-01	Rice	golgi, plastid	32.73	49.85
TraesCS4A01G341100.1	Wheat	plastid	50.6	48.55
TraesCS5B01G533400.1	Wheat	plastid	50.0	48.54
TraesCS5D01G531600.2	Wheat	plastid	50.0	48.07
HORVU5Hr1G120570.1	Barley	cytosol	48.59	46.36

Protein Annotations

MapMan:23.1.7.5	GO:A0A078IQD9	UniProt:A0A078IQD9	EnsemblPlants:CDY51594	ProteinID:CDY51594	ProteinID:CDY51594.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032977
GO:GO:0051205	EnsemblPlantsGene:GSBRNA2T00003799001	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI0004EEBC81	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:

Description

BnaA07g36790DBnaA07g36790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQD9]

Coordinates

chrLK033009:-:58235..61386

Molecular Weight (calculated)

54341.0 Da

IEP (calculated)

8.851

GRAVY (calculated)

-0.219

Length

498 amino acids

Sequence
(BLAST)

001: MASSISLRPT SLILSSSFST GRVLHFRRSP FIHRPSSSSS SCRRTLVAQF GLGPGSFPDP GFSLDLIKDH AESLLYTIAD AAVSSSETFE SVSGTTTKQN
101: SDWFSGIANY METILKVLKD GLSTVHVPYS YGFAIILLTV LVKAATFPLT KKQVESAMAM KSLQPQIKAI QERYAGDQER IQLETARLYK LAGINPLAGC
201: LPTLATIPVW IGLYRALSNV ADEGLLTEGF FWIPSLAGPT TVAARQSGSG ISWLFPFIEG HPPLGWSDTL AYLVLPLLLI FSQYLSIQIM QSSQPQSNDP
301: AMKSSQAVTK FLPLMIGYFA LSVPSGLSLY WLTNNILSTA QQVWLQKYGG AKNPMEKLTN LVMKEDKTQK VEKSISEPLV KKPVSELKVP KEKGGEKVTS
401: EGPKPGERFR LLKEQEAKRR REKEDARQKA EAALSNQNIG SVQEQEEKSD TADVAVGNNE KAKLSAVGET ADGSVAVNGK PSIHGVGHDT EQHHSHEE

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.