Factsheet for TraesCS5D01G531600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G533400.1	Wheat	plastid	88.22	89.08
TraesCS4A01G341100.1	Wheat	plastid	82.43	82.27
HORVU5Hr1G120570.1	Barley	cytosol	80.69	80.08
Os03t0844700-01	Rice	golgi, plastid	45.95	72.78
KXG37151	Sorghum	plastid	66.02	67.99
Zm00001d012861_P001	Maize	plastid	63.51	66.2
Bra012507.1-P	Field mustard	plastid	48.07	50.0
TraesCS3D01G075800.1	Wheat	plastid	43.44	50.0
GSMUA_Achr5P25520_001	Banana	plastid	51.93	50.0
CDY51594	Canola	plastid	48.07	50.0
CDX84950	Canola	plastid	46.53	49.18
Bra032799.1-P	Field mustard	plastid	46.53	49.18
CDY03882	Canola	plastid	47.1	49.09
CDY27589	Canola	plastid	46.33	48.98
KRG97503	Soybean	plastid	49.81	48.31
AT1G24490.1	Thale cress	plastid	46.53	48.3
PGSC0003DMT400027904	Potato	plastid	49.03	48.02
VIT_01s0137g00220.t01	Wine grape	plastid	49.61	47.68
Solyc05g014050.2.1	Tomato	plastid	48.84	47.65
KRH31380	Soybean	plastid	48.84	46.59
Bra032798.1-P	Field mustard	nucleus	14.86	41.85
Bra040623.1-P	Field mustard	endoplasmic reticulum	12.16	32.98

Protein Annotations

MapMan:23.1.7.5	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0032977	GO:GO:0072598	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096	PANTHER:PTHR12428	PANTHER:PTHR12428:SF19
TIGRFAMs:TIGR03592	EnsemblPlantsGene:TraesCS5D01G531600	EnsemblPlants:TraesCS5D01G531600.2	InterPro:YidC/ALB3/OXA1/COX18	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:547050457..547057862

Molecular Weight (calculated)

55425.6 Da

IEP (calculated)

5.121

GRAVY (calculated)

-0.255

Length

518 amino acids

Sequence
(BLAST)

001: MAAPSLHLLL PRHPQALLAL PPPPPRASPS VLALPRFPLP ARRRGRAVAA LGWGGGGGIE DVGQLFSRVE AFLYTVADAA VAAAPGVAAD GGAKEAAAAG
101: DWFAGITGSM ETVLKVLKDG LLTLHVPYPY GFAIILLTVL IKGATFPLTK KQVESALAMR SLQPQVKAIQ ERHAGDQERI QLETAHLYKL SGVDPLAGCL
201: PTLVTIPVWI GLYKALSNVA NEGLLTEGFF WIPSLAGPTT IAARESGQGI SWLFPFTDGH PPLGWSDTMA YLVLPILLVI SQYLSAQIMQ SSQSNDPSQQ
301: GAQAAVKFLP LLIGYFALSV PSGLSLYWLT NNVLSSAQQV WLQKLGGAKN PVQEYIDKLA REESTNVGKY EPADKSEVLP KAGKPQPGQV PKPSEPQRGG
401: RFKKLMEEES RRKQLVEQAK QTEEASVDSF AIDGKQDFDS SAPDTKDEQE ESHENEPISA SSNGGLSHDT HEATPNRNTE EGTIQEATDA DSHSSVSNAA
501: SPSDNRLRGQ DEDGKDAE

Best Arabidopsis Sequence Match ( AT1G24490.1 )
(BLAST)

001: MSSTISLKPT HLILSSFSTG KVLQFRRSRF SHTPSSSSSR YRTLVAQLGF RPDSFDFIKD HAENLLYTIA DAAVSSSETF ESVAGTTTKT TQSNDWFSGI
101: ANYMETILKV LKDGLSTVHV PYSYGFAIIL LTVLVKAATF PLTKKQVESA MAMKSLTPQI KAIQERYAGD QEKIQLETAR LYKLAGINPL AGCLPTLATI
201: PVWIGLYRAL SNVADEGLLT EGFFWIPSLA GPTTVAARQN GSGISWLFPF IEGHPPLGWP DTLAYLVLPL LLVFSQYLSI QIMQSSQSND PAMKSSQAVT
301: KLLPLMIGYF ALSVPSGLSL YWLTNNILST AQQVWLQKYG GAKNPVEKFT NLVTKEDKTQ QIEKSFSEPL VQKSVSELKI PREKGGEKVT PECPKPGERF
401: RLLKEQEAKR RREKEERQKA EAALSNQNTD KAHEQDEKSD TAIVAEDDKK TELSAVDETS DGTVAVNGKP SIQKDETTNG TFGIGHDTEQ QHSHETEKR

Arabidopsis Description

ALB4ALBINO3-like protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.