Factsheet for Bra035669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000144.1-P
Bra000947.1-P
Bra004340.1-P
Bra004504.1-P
Bra004937.1-P
Bra005019.1-P
Bra006913.1-P
Bra007731.1-P
Bra008533.1-P
Bra013013.1-P
Bra013653.1-P
Bra017055.1-P
Bra018169.1-P
Bra019349.1-P
Bra019494.1-P
Bra028906.1-P
Bra029563.1-P
Bra033802.1-P
Bra035669.1-P
Bra036909.1-P
Bra037380.1-P
Bra037620.1-P
Bra038239.1-P
Bra038815.1-P
Bra039315.1-P
Bra040482.1-P
Bra041123.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28800.1	Bra004340.1-P	AT1G68830.1	22616989
AT2G28800.1	Bra038815.1-P	AT2G18710.1	12217076
AT2G28800.1	Bra038815.1-P	AT2G18710.1	15988575
AT2G28800.1	Bra035669.1-P	AT2G28800.1	15988575
AT2G28800.1	Bra000144.1-P	AT2G39730.1	22616989
AT2G28800.1	Bra005019.1-P	AT2G39730.1	22616989
AT2G28800.1	Bra017055.1-P	AT2G39730.1	22616989
AT2G28800.1	Bra004937.1-P	AT2G45770.1	14517205
AT2G28800.1	Bra039315.1-P	AT2G45770.1	14517205
AT2G28800.1	Bra004504.1-P	AT2G46820.1	22616989
AT2G28800.1	Bra040482.1-P	AT2G46820.1	22616989
AT2G28800.1	Bra038239.1-P	AT3G19900.1	22616989
AT2G28800.1	Bra033802.1-P	AT3G46780.1	22616989
AT2G28800.1	Bra018169.1-P	AT3G47070.1	22616989
AT2G28800.1	Bra019494.1-P	AT3G47070.1	22616989
AT2G28800.1	Bra006913.1-P	AT3G52230.1	22616989
AT2G28800.1	Bra007731.1-P	AT3G63160.1	22616989
AT2G28800.1	Bra000947.1-P	AT4G01150.1	22616989
AT2G28800.1	Bra008533.1-P	AT4G01150.1	22616989
AT2G28800.1	Bra037380.1-P	AT4G01150.1	22616989
AT2G28800.1	Bra029563.1-P	AT4G05180.1	22616989
AT2G28800.1	Bra036909.1-P	AT4G14870.1	15988575
AT2G28800.1	Bra013653.1-P	AT4G22890.1	22616989
AT2G28800.1	Bra019349.1-P	AT4G22890.1	22616989
AT2G28800.1	Bra028906.1-P	AT5G01530.1	22616989
AT2G28800.1	Bra013013.1-P	AT5G23060.1	22616989
AT2G28800.1	Bra037620.1-P	AT5G23060.1	22616989
AT2G28800.1	Bra041123.1-P	ATCG00280.1	15988575
AT2G28800.1	Bra041123.1-P	ATCG00280.1	22616989

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31733	Canola	plastid	98.88	99.55
AT2G28800.1	Thale cress	plastid	86.13	83.33
VIT_06s0004g04460.t01	Wine grape	plastid	74.05	72.75
Solyc11g066110.1.1	Tomato	plastid	72.48	72.48
PGSC0003DMT400001063	Potato	plastid	72.48	72.32
KRH24811	Soybean	plastid	71.59	71.11
KRH29812	Soybean	plastid	71.14	70.67
HORVU3Hr1G013690.6	Barley	mitochondrion	65.32	70.02
TraesCS3B01G089800.1	Wheat	plastid	67.34	67.04
TraesCS3A01G075700.1	Wheat	plastid	67.11	66.82
TraesCS3D01G075800.1	Wheat	plastid	67.11	66.67
Os01t0151200-01	Rice	plasma membrane	68.46	66.67
Zm00001d039852_P001	Maize	plastid	66.89	65.71
KXG31875	Sorghum	plastid	66.89	65.71
GSMUA_Achr9P03990_001	Banana	mitochondrion, plastid	65.1	65.54
Zm00001d008625_P001	Maize	mitochondrion	67.11	64.52
Bra032799.1-P	Field mustard	plastid	51.45	46.94
Bra012507.1-P	Field mustard	plastid	51.45	46.18
GSMUA_Achr5P28630_001	Banana	cytosol, nucleus, plasma membrane	66.0	42.14
Bra032798.1-P	Field mustard	nucleus	14.99	36.41
Bra040623.1-P	Field mustard	endoplasmic reticulum	12.98	30.37

Protein Annotations

MapMan:23.1.7.5	EnsemblPlantsGene:Bra035669	EnsemblPlants:Bra035669.1	EnsemblPlants:Bra035669.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009987	GO:GO:0010027	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0019904	GO:GO:0032977	GO:GO:0032991	GO:GO:0043234	GO:GO:0045038	GO:GO:0051205
GO:GO:0070208	GO:GO:0072598	GO:GO:0090342	UniProt:M4F3L9	InterPro:Membr_insert_YidC/Oxa1_C	PFAM:PF02096
PANTHER:PTHR12428	PANTHER:PTHR12428:SF19	TIGRFAMs:TIGR03592	TMHMM:TMhelix	UniParc:UPI0002544046	InterPro:YidC/ALB3/OXA1/COX18
SEG:seg	:	:	:	:	:

Description

AT2G28800 (E=3e-180) ALB3, ABL3 | ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter

Coordinates

chrA04:-:12952146..12954691

Molecular Weight (calculated)

48270.0 Da

IEP (calculated)

9.714

GRAVY (calculated)

-0.077

Length

447 amino acids

Sequence
(BLAST)

001: MARVLISSPS SFFGSPLLKP SSSSRHVAGG GGGSLQFRNK HLVRFSLNEL PPLHGSVDIG AILTRAESFL YTVADAAVVG GAADSAVSTD PAVQKSGGWF
101: GFISDGMELV LKFLKDGLTA VHVPYAYGFA IILLTIIVKA ATYPLTKQQV ESTMAMQNLQ PKIKAIQQRY AGNQERIQLE TSRLYKQAGV NPLAGCLPTL
201: ATIPVWIGLY QALSNVANEG LFTEGFFWIP SLGGPTSIAA RQSGSGVSWL FPFVDGHPPL GWGDTAAYLV LPVLLIVSQY VSMEIMKPPQ TDDPAQKNTL
301: LVFKFLPLMI GYFALSVPSG LSIYWFTNNV LSTAQQVWLR KLGGAAPAVN ENASGIITAG RAKRSIAQPD DAGERFRQLK EQEKRSKKNK AVAKDTVELL
401: ESQSESEEGS DDEEEEVREG ALASSTSKPL PDVGQRRSKR SKRKRAV

Best Arabidopsis Sequence Match ( AT2G28800.1 )
(BLAST)

001: MARVLVSSPS SFFGSPLIKP SSSLRHSGVG GGGTAQFLPY RSNNNKLFTT STTVRFSLNE IPPFHGLDSS VDIGAIFTRA ESLLYTIADA AVVGADSVVT
101: TDSSAVQKSG GWFGFISDAM ELVLKILKDG LSAVHVPYAY GFAIILLTII VKAATYPLTK QQVESTLAMQ NLQPKIKAIQ QRYAGNQERI QLETSRLYKQ
201: AGVNPLAGCL PTLATIPVWI GLYQALSNVA NEGLFTEGFF WIPSLGGPTS IAARQSGSGI SWLFPFVDGH PPLGWYDTVA YLVLPVLLIA SQYVSMEIMK
301: PPQTDDPAQK NTLLVFKFLP LMIGYFALSV PSGLSIYWLT NNVLSTAQQV YLRKLGGAKP NMDENASKII SAGRAKRSIA QPDDAGERFR QLKEQEKRSK
401: KNKAVAKDTV ELVEESQSES EEGSDDEEEE AREGALASST TSKPLPEVGQ RRSKRSKRKR TV

Arabidopsis Description

ALB3ALB3 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.