Factsheet for Bra013013.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02202	Canola	plastid	99.74	99.74
Bra037620.1-P	Field mustard	cytosol, peroxisome, plastid	65.89	94.44
AT5G23060.1	Thale cress	plastid	86.82	86.82
KRH03216	Soybean	nucleus, plastid	67.18	65.49
KRH56726	Soybean	nucleus, plastid	66.67	65.15
PGSC0003DMT400062981	Potato	plastid	60.47	60.0
Solyc03g114450.2.1	Tomato	plastid	60.21	59.44
Os02t0729400-01	Rice	cytosol, nucleus, plastid	50.39	58.91
VIT_17s0000g04490.t01	Wine grape	plastid	63.82	57.98
TraesCS6B01G320900.1	Wheat	plastid	51.68	51.41
TraesCS6D01G271900.1	Wheat	plastid	51.42	51.16
TraesCS6A01G290600.1	Wheat	plastid	50.9	50.64
EES05589	Sorghum	plastid	49.1	48.97
Zm00001d051746_P001	Maize	plastid	49.87	48.86
GSMUA_Achr9P18370_001	Banana	cytosol	59.95	44.87
HORVU6Hr1G072740.1	Barley	cytosol, plastid	49.87	44.57
Bra003389.1-P	Field mustard	plastid	17.05	9.59

Protein Annotations

EnsemblPlants:Bra013013.1	EnsemblPlants:Bra013013.1-P	EnsemblPlantsGene:Bra013013	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR34209	PANTHER:PTHR34209:SF2	PFscan:PS50206	SEG:seg
SUPFAM:SSF52821	TMHMM:TMhelix	UniParc:UPI0002540491	UniProt:M4D953	MapMan:26.5.1.2	:

Description

AT5G23060 (E=2e-186) CaS | CaS (Calcium sensing receptor)

Coordinates

chrA03:+:21019630..21021549

Molecular Weight (calculated)

41279.7 Da

IEP (calculated)

10.004

GRAVY (calculated)

-0.030

Length

387 amino acids

Sequence
(BLAST)

001: MAMAEMAMKS SVTTAKLTLP PSSSSCKKRV RQVSVALPTT TSISLLSVFS SPPPEAKAAV SISKDQIVSS LTEVEKTINQ VQETGSSVFD ATQRVFQVVG
101: DALKPALDTA LPIAKQAGEE ALKLASPAFS EASKKAQEAM QSSGIDAEPV FNAAKTVTDV AQQTTKAIED AKPIASSTME TISSADPSVV VVAAGAAFIA
201: YLLLPPVWSA ISFNFRGYKG DLTPAQTLDL LCSKNYLMVD IRSEKEKEKA GIPRLPSNAK NSMIAIPLEE LPNKVKGIVR NSKRVEAEIA ALKISYLKRI
301: NKGSNIIIMD SYSDSAKIVA KTLKVLGFKN CWIVTDGFSG GRGWLQSRLG TDSYNFSFAQ VLSPSRIIPA ASRFGTRSGT KFLPSSD

Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)

001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD

Arabidopsis Description

CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.