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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
YLoc:cytosol
plastid: 23257241
nucleus: 19621931
gfp PMID: 23257241 doi
L Xu, C Carrie, SR Law, MW Murcha, J Whelan
Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G271900.1 Wheat plastid 81.87 69.67
TraesCS6B01G320900.1 Wheat plastid 80.97 68.89
EES05589 Sorghum plastid 80.66 68.81
TraesCS6A01G290600.1 Wheat plastid 80.66 68.64
Zm00001d051746_P001 Maize plastid 77.64 65.06
HORVU6Hr1G072740.1 Barley cytosol, plastid 80.06 61.2
Bra037620.1-P Field mustard cytosol, peroxisome, plastid 44.71 54.81
Bra013013.1-P Field mustard plastid 58.91 50.39
KRH03216 Soybean nucleus, plastid 59.52 49.62
AT5G23060.1 Thale cress plastid 57.1 48.84
KRH56726 Soybean nucleus, plastid 58.31 48.74
PGSC0003DMT400062981 Potato plastid 57.1 48.46
VIT_17s0000g04490.t01 Wine grape plastid 57.1 44.37
GSMUA_Achr9P18370_001 Banana cytosol 64.65 41.39
Solyc03g059170.2.1 Tomato nucleus, plastid 5.14 13.71
CDX71878 Canola nucleus, plastid 3.32 10.78
Os01t0896500-01 Rice plasma membrane 17.52 9.31
Protein Annotations
EnsemblPlants:Os02t0729400-01EnsemblPlantsGene:Os02g0729400Gene3D:3.40.250.10InterPro:IPR001763InterPro:IPR036873InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sfPANTHER:PTHR34209PANTHER:PTHR34209:SF2PFAM:PF00581PFscan:PS50206ProteinID:BAS80729.1
SEG:segSUPFAM:SSF52821TMHMM:TMhelixUniParc:UPI000393A3DFUniProt:A0A0N7KG12MapMan:26.5.1.2
Description
SULFURTRANSFERASE 11Similar to Extracellular calcium sensing receptor. (Os02t0729400-01)
Coordinates
chr2:-:30361908..30363528
Molecular Weight (calculated)
34058.0 Da
IEP (calculated)
9.924
GRAVY (calculated)
0.090
Length
331 amino acids
Sequence
(BLAST)
001: KEDVAGSVTK VVDTVDQVIG VGGKVAEQSA GVLKALGEAA KPALPALKSA GEQALKLASP VVSGASKQAT EALQGAGVDP APVLSAAKTV ADAAQQGTKV
101: IDAAKPIASA TVETIGSLGS ADYVVVAGAA FLAYLLLPPA WSLLSFTLRG YKGDLTAAQA LDMVTSQDYV LIDVRTEKDK AKTGVPQLPS NAKNKLISIP
201: LEELPSKTKS MVRNAKQAEA EIAALKISYL KRIGKGSNVI IMDSYCDSSK IVAKTLNSVG FKNCWVMAGG FSGRKGWAQS RLGTDSYNLS VVEVVTPSRV
301: IPAAADRLVT ASSSASRTTT SRKLLPGSVD G
Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)
001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD
Arabidopsis Description
CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.