Factsheet for Bra037620.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23708	Canola	plastid	95.56	67.01
Bra013013.1-P	Field mustard	plastid	94.44	65.89
AT5G23060.1	Thale cress	plastid	88.52	61.76
KRH56726	Soybean	nucleus, plastid	68.89	46.97
KRH03216	Soybean	nucleus, plastid	68.89	46.85
Os02t0729400-01	Rice	cytosol, nucleus, plastid	54.81	44.71
Solyc03g114450.2.1	Tomato	plastid	64.44	44.39
PGSC0003DMT400062981	Potato	plastid	64.07	44.36
VIT_17s0000g04490.t01	Wine grape	plastid	66.67	42.25
TraesCS6D01G271900.1	Wheat	plastid	53.33	37.02
TraesCS6B01G320900.1	Wheat	plastid	53.33	37.02
TraesCS6A01G290600.1	Wheat	plastid	52.59	36.5
EES05589	Sorghum	plastid	50.0	34.79
Zm00001d051746_P001	Maize	plastid	50.74	34.68
GSMUA_Achr9P18370_001	Banana	cytosol	63.33	33.08
HORVU6Hr1G072740.1	Barley	cytosol, plastid	52.59	32.79
Bra003389.1-P	Field mustard	plastid	16.67	6.54

Protein Annotations

EnsemblPlants:Bra037620.1	EnsemblPlants:Bra037620.1-P	EnsemblPlantsGene:Bra037620	Gene3D:3.40.250.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR036873	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR34209	PANTHER:PTHR34209:SF2	SEG:seg
SUPFAM:SSF52821	TMHMM:TMhelix	UniParc:UPI0002543998	UniProt:M4F957	MapMan:35.1	:

Description

AT5G23060 (E=8e-082) CaS | CaS (Calcium sensing receptor)

Coordinates

chrA01:-:13362318..13369112

Molecular Weight (calculated)

28824.4 Da

IEP (calculated)

8.787

GRAVY (calculated)

-0.031

Length

270 amino acids

Sequence
(BLAST)

001: MCSSPRKVQE TGSSVFDATQ RVFQVVGDAL KPALDTALPI AKQAGEEALK IASPAFSEAS KKAQEAIESS GIDAELVFNA AKTVTDVAQQ TTKAIEDARP
101: IASSTMETIS AADPSVVVVA AGAAFIAYLL LPPVWSAISF NFRGYKGDLT PAQTLDLLCS KNYLMVDIRS EKEKEKAGIP RLPSNAKNSM IAIPYSDSAK
201: IVAKTLKVLG FKNCWIVTDG FSGGRGWLQS RLGTDSYNFS FAQVLSPSRI IPAASRFGTR SETKFLPSSD

Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)

001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD

Arabidopsis Description

CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.