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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23708 Canola plastid 88.11 88.57
Bra037620.1-P Field mustard cytosol, peroxisome, plastid 61.76 88.52
Bra013013.1-P Field mustard plastid 86.82 86.82
CDY02202 Canola plastid 86.56 86.56
CDY62677 Canola plastid 86.56 86.56
KRH03216 Soybean nucleus, plastid 68.99 67.25
KRH56726 Soybean nucleus, plastid 67.44 65.91
PGSC0003DMT400062981 Potato plastid 62.79 62.31
Solyc03g114450.2.1 Tomato plastid 62.79 61.99
VIT_17s0000g04490.t01 Wine grape plastid 64.86 58.92
Os02t0729400-01 Rice cytosol, nucleus, plastid 48.84 57.1
TraesCS6B01G320900.1 Wheat plastid 50.65 50.39
TraesCS6D01G271900.1 Wheat plastid 50.39 50.13
TraesCS6A01G290600.1 Wheat plastid 49.61 49.36
EES05589 Sorghum plastid 47.55 47.42
Zm00001d051746_P001 Maize plastid 48.32 47.34
GSMUA_Achr9P18370_001 Banana cytosol 58.91 44.1
HORVU6Hr1G072740.1 Barley cytosol, plastid 49.1 43.88
AT3G59780.1 Thale cress plastid 16.54 9.33
Protein Annotations
MapMan:26.5.1.2Gene3D:3.40.250.10EntrezGene:832370ProteinID:AED93114.1ArrayExpress:AT5G23060EnsemblPlantsGene:AT5G23060
RefSeq:AT5G23060TAIR:AT5G23060RefSeq:AT5G23060-TAIR-GEnsemblPlants:AT5G23060.1TAIR:AT5G23060.1EMBL:AY045798
EMBL:AY079331EMBL:AY341888Unigene:At.71491ProteinID:BAB09823.1EMBL:BT000666Symbol:CaS
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0007275
GO:GO:0008150GO:GO:0009507GO:GO:0009534GO:GO:0009535GO:GO:0009536GO:GO:0009579
GO:GO:0009628GO:GO:0009704GO:GO:0009791GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0071277GO:GO:0090333InterPro:IPR001763InterPro:IPR036873RefSeq:NP_197697.1PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50206
PANTHER:PTHR34209PANTHER:PTHR34209:SF2UniProt:Q9FN48InterPro:Rhodanese-like_domInterPro:Rhodanese-like_dom_sfSUPFAM:SSF52821
TMHMM:TMhelixUniParc:UPI00000AC316SEG:seg:::
Description
CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
Coordinates
chr5:-:7736518..7738535
Molecular Weight (calculated)
41287.6 Da
IEP (calculated)
10.000
GRAVY (calculated)
-0.054
Length
387 amino acids
Sequence
(BLAST)
001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.