Factsheet for GSMUA_Achr9P18370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0729400-01	Rice	cytosol, nucleus, plastid	41.39	64.65
Bra037620.1-P	Field mustard	cytosol, peroxisome, plastid	33.08	63.33
KRH56726	Soybean	nucleus, plastid	46.62	60.86
KRH03216	Soybean	nucleus, plastid	46.23	60.2
Bra013013.1-P	Field mustard	plastid	44.87	59.95
CDY62677	Canola	plastid	44.68	59.69
CDY02202	Canola	plastid	44.68	59.69
CDY23708	Canola	plastid	44.1	59.22
AT5G23060.1	Thale cress	plastid	44.1	58.91
TraesCS6B01G320900.1	Wheat	plastid	42.94	57.07
TraesCS6D01G271900.1	Wheat	plastid	42.94	57.07
PGSC0003DMT400062981	Potato	plastid	42.75	56.67
Solyc03g114450.2.1	Tomato	plastid	42.94	56.63
TraesCS6A01G290600.1	Wheat	plastid	42.36	56.3
EES05589	Sorghum	plastid	41.59	55.41
Zm00001d051746_P001	Maize	plastid	41.78	54.68
VIT_17s0000g04490.t01	Wine grape	plastid	43.33	52.58
HORVU6Hr1G072740.1	Barley	cytosol, plastid	43.13	51.5
GSMUA_Achr8P32230_001	Banana	cytosol, plastid	6.96	12.33
GSMUA_Achr8P32240_001	Banana	plastid	7.16	9.23

Protein Annotations

MapMan:26.5.1.2	Gene3D:3.40.250.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0007275	GO:GO:0008150	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009704	GO:GO:0009791	GO:GO:0009987
GO:GO:0016020	GO:GO:0071277	GO:GO:0090333	EnsemblPlantsGene:GSMUA_Achr9G18370_001	EnsemblPlants:GSMUA_Achr9P18370_001	EnsemblPlants:GSMUA_Achr9T18370_001
InterPro:IPR001763	InterPro:IPR036873	UniProt:M0U1E4	PFscan:PS50206	PANTHER:PTHR34209	PANTHER:PTHR34209:SF2
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	SUPFAM:SSF52821	UniParc:UPI000294989B	SEG:seg	:

Description

calcium sensing receptor [Source:Projected from Arabidopsis thaliana (AT5G23060) TAIR;Acc:AT5G23060]

Coordinates

chr9:-:12965461..12969188

Molecular Weight (calculated)

55220.0 Da

IEP (calculated)

10.099

GRAVY (calculated)

-0.182

Length

517 amino acids

Sequence
(BLAST)

001: MTVPCIGRNR QSPEDWDAPA ALTVITRQIS SSTQSSVRFF DNPPPHKRSG EEDLLLYRTQ PTTRSPTVAR TQSTRRPIEP TTTESVLKVR IDHTHSGSSR
101: ARGEGDEEEE EMAMVAFRAA AAASTSPRPP LSKPQQAQPQ HHQSKLLHPK QPLPLLPPPT PAALSFVAVL SAAVPGEARA FSFPKEDIVS SLTKAEDTIG
201: QVVDVGSSVW GFSLDVFRSL SETLKPGVDA ALPILQSASK EALKIASPVV SDASKQAKEA LQSVGVDPSP VLTAAQTIAD AAQQTTKIIE GAKPLASATV
301: EKITSSSPSV VVVTAGALFV GYLLLPPIWS TISFNFRGYK GNLSPAQALD VITAQNYLMI DIRSEKDKNK AGVPRLPSNA KNKMISVPLE ELPSKIKGLV
401: RSSKKVEADI AALKISYLKK INKGSNIVIM DSYSDIAKLV ARTLTSLGFK NCWIVTDGFS GGKGWLQSRL GTDSYNASLV EVLSPSRVIP AAAARFGTTS
501: STALQSTRKL LPGSVEN

Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)

001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD

Arabidopsis Description

CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.