Factsheet for HORVU6Hr1G072740.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	plastid
MultiLoc:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G271900.1	Wheat	plastid	79.68	88.69
TraesCS6B01G320900.1	Wheat	plastid	79.45	88.43
TraesCS6A01G290600.1	Wheat	plastid	78.52	87.4
Os02t0729400-01	Rice	cytosol, nucleus, plastid	61.2	80.06
EES05589	Sorghum	plastid	57.97	64.69
Zm00001d051746_P001	Maize	plastid	57.51	63.04
Bra037620.1-P	Field mustard	cytosol, peroxisome, plastid	32.79	52.59
KRH03216	Soybean	nucleus, plastid	45.96	50.13
Bra013013.1-P	Field mustard	plastid	44.57	49.87
AT5G23060.1	Thale cress	plastid	43.88	49.1
KRH56726	Soybean	nucleus, plastid	44.11	48.23
PGSC0003DMT400062981	Potato	plastid	41.8	46.41
VIT_17s0000g04490.t01	Wine grape	plastid	43.88	44.6
GSMUA_Achr9P18370_001	Banana	cytosol	51.5	43.13
Solyc03g059170.2.1	Tomato	nucleus, plastid	3.93	13.71
HORVU3Hr1G089650.2	Barley	plastid	17.09	12.31
CDX71878	Canola	nucleus, plastid	2.54	10.78

Protein Annotations

EnsemblPlants:HORVU6Hr1G072740.1	EnsemblPlantsGene:HORVU6Hr1G072740	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	ncoils:Coil	PANTHER:PTHR34209	PANTHER:PTHR34209:SF2	PFAM:PF00581	PFscan:PS50206
SEG:seg	SUPFAM:SSF52821	UniParc:UPI000B467FB3	UniProt:A0A287UN56	MapMan:26.5.1.2	:

Description

No Description!

Coordinates

chrchr6H:-:504918224..504920368

Molecular Weight (calculated)

44724.8 Da

IEP (calculated)

9.876

GRAVY (calculated)

0.085

Length

433 amino acids

Sequence
(BLAST)

001: HPLLATQTEK CAKEVSAIDT AVAAAARACV AERAALVGRL YGEQAGAMAF TPTSVSATLP PSAPPPPAAT KGTPRRAPWN APPMAASPTA ALLAVTPAAH
101: AAAFSKEEVA GSFTKAVDTV DVVIGVGGQV AEQSFVVLRA LVEAAKPALP VLQSAGEQAL KLASPVVSDA SRQATEALQG AGVDLAPLQS AFKTFADAAQ
201: PAIGAAKPIA SETVQTIGSL EGTDYVVAAG AAFLAYLLLP PAWSLLSYGL RGYKGDLNPA QALDMVTSQG YLIIDVRSEN DKGKAGVPQL PSNAKNKIIS
301: LPLEELPNKI KGMVRNAKRA EAEIAALKIS YLKRIGKGSN IVVMDSYGDN SKIVAKTLNS VGFKNCWVMA GGFSGRKGWA QSRLGTDSYN LSVVEVIKPS
401: RVIPAAAERF VTVSSTSTPS RTTRKLLPGS VDN

Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)

001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD

Arabidopsis Description

CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.