Factsheet for TraesCS6D01G271900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G320900.1	Wheat	plastid	97.94	97.94
TraesCS6A01G290600.1	Wheat	plastid	96.14	96.14
Os02t0729400-01	Rice	cytosol, nucleus, plastid	69.67	81.87
HORVU6Hr1G072740.1	Barley	cytosol, plastid	88.69	79.68
EES05589	Sorghum	plastid	66.32	66.49
Zm00001d051746_P001	Maize	plastid	65.81	64.81
Bra037620.1-P	Field mustard	cytosol, peroxisome, plastid	37.02	53.33
KRH03216	Soybean	nucleus, plastid	52.7	51.64
Bra013013.1-P	Field mustard	plastid	51.16	51.42
AT5G23060.1	Thale cress	plastid	50.13	50.39
KRH56726	Soybean	nucleus, plastid	50.39	49.49
PGSC0003DMT400062981	Potato	plastid	47.56	47.44
VIT_17s0000g04490.t01	Wine grape	plastid	49.36	45.07
GSMUA_Achr9P18370_001	Banana	cytosol	57.07	42.94
Solyc03g059170.2.1	Tomato	nucleus, plastid	4.63	14.52
TraesCS3D01G392600.1	Wheat	plastid	18.77	12.19
CDX71878	Canola	nucleus, plastid	2.83	10.78

Protein Annotations

EnsemblPlants:TraesCS6D01G271900.1	EnsemblPlantsGene:TraesCS6D01G271900	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873	InterPro:Rhodanese-like_dom
InterPro:Rhodanese-like_dom_sf	ncoils:Coil	PANTHER:PTHR34209	PANTHER:PTHR34209:SF2	PFAM:PF00581	PFscan:PS50206
SEG:seg	SUPFAM:SSF52821	TIGR:cd00158	MapMan:26.5.1.2	:	:

Description

No Description!

Coordinates

chr6D:-:380704873..380706540

Molecular Weight (calculated)

40010.1 Da

IEP (calculated)

10.301

GRAVY (calculated)

0.096

Length

389 amino acids

Sequence
(BLAST)

001: MAFTPTSASA TLPPSAPPPP AATKGTPRRA PWNAAPLAAA AASSTAALLA ATPAARAAAL SKEDVAGSFT KVVDTVDVVI GVGGKVAEQS FVVLRALGEA
101: AKPALPVLQS AGEQALKLAS PVVSDASRQA TEALQGAGVD LARFQSAFKT VADAAQPAIG AAKPIASETV QTIGSLEGTD YVVAAGAAFL AYLLLPPAWS
201: LLSYGLRGYK GDLSPAQALD MVTSQGYLII DVRSENDKAK AGVPQLPSNA KNKIIALPLE ELPNKIKGMV RNAKRAEAEI AALKISYLKR IGKGSNIVVM
301: DSYGDNSKIV AKTLNSVGFK NCWVMAGGFS GRKGWAQSRL GTDSYNLSVV EVVKPSRVIP AAAERFVTVS STSTPSRTSR KLLPGSVDS

Best Arabidopsis Sequence Match ( AT5G23060.1 )
(BLAST)

001: MAMAEMATKS SLSAKLTLPS SSTKKTLSLR QVSVSLPTST SISLLSLFAS PPHEAKAAVS IPKDQIVSSL TEVEKTINQV QETGSSVFDA TQRVFQVVGD
101: ALKPALDTAL PIAKQAGEEA MKLASPAFSE ASKKAQEAMQ SSGFDSEPVF NAAKTVTDVA QQTSKAIEDA KPIASSTMDT ISSADPSVIV VAAGAAFLAY
201: LLLPPVFSAI SFNFRGYKGD LTPAQTLDLL CTKNYLMVDI RSEKDKEKAG IPRLPSNAKN RVISIPLEEL PNKVKGIVRN SKRVEAEIAA LKISYLKKIN
301: KGSNIIILDS YTDSAKIVAK TLKVLGYKNC YIVTDGFSGG RGWLQSRLGT DSYNFSFAQV LSPSRIIPAA SRSFGTRSGT KFLPSSD

Arabidopsis Description

CASCalcium sensing receptor, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN48]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.