Factsheet for GSMUA_Achr8P32230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G392600.1	Wheat	plastid	58.22	28.38
TraesCS3B01G430900.1	Wheat	plastid	57.53	28.05
TraesCS3A01G398500.1	Wheat	plastid	57.53	28.05
HORVU3Hr1G089650.2	Barley	plastid	57.53	27.95
EES04035	Sorghum	plastid	58.56	27.94
VIT_05s0094g00820.t01	Wine grape	plastid	61.3	27.58
Zm00001d042526_P001	Maize	plastid	57.53	27.45
Os01t0896500-01	Rice	plasma membrane	58.22	27.29
KRH31574	Soybean	plastid	57.19	25.97
KRG97340	Soybean	plastid	56.51	25.38
CDX67812	Canola	plastid	54.11	23.76
AT3G59780.1	Thale cress	plastid	54.79	23.32
CDX98394	Canola	plastid	53.08	23.27
Bra003389.1-P	Field mustard	plastid	52.05	22.09
Solyc03g059180.2.1	Tomato	plastid	33.56	18.35
GSMUA_Achr9P18370_001	Banana	cytosol	12.33	6.96
GSMUA_Achr8P32240_001	Banana	plastid	2.74	2.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P32230_001	EnsemblPlants:GSMUA_Achr8T32230_001	EnsemblPlantsGene:GSMUA_Achr8G32230_001	Gene3D:3.40.250.10	InterPro:IPR001763	InterPro:IPR036873
InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	PANTHER:PTHR34209	PANTHER:PTHR34209:SF1	PFscan:PS50206	SEG:seg
SUPFAM:SSF52821	UniParc:UPI0002955B17	UniProt:M0TVH5	MapMan:35.2	:	:

Description

rhodanese-like domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G32230_001]

Coordinates

chr8:-:33726196..33730184

Molecular Weight (calculated)

32023.6 Da

IEP (calculated)

9.965

GRAVY (calculated)

-0.235

Length

292 amino acids

Sequence
(BLAST)

001: MIESAVNFSP WIKICKTFFR HNDSEDLRER DGVPDLRRGA RSKYASVVLP EIDGSVRKLL KGGREVDYSL IAAVIRSLKI IKNGSKVIVM DANGGHSKAI
101: ARSLKKLGVK ASTKQFNPYL VQGGFQSWVK NGLRIKELKP ETALTLLNEE AEAIIEDIKP TPTLVIGYVV GISAAIYALL EWEKTLQVIG IIGLGQSLYR
201: RVASYDDSKD LKKDVGLLLS PVRLGAQAFS WAATRLEPNK FGLPTSPSST AVRDRVVQAA AKHESQPSDT NEPKGLPQES VIQTNENQVS EA

Best Arabidopsis Sequence Match ( AT3G59780.1 )
(BLAST)

001: MFPLCSATSC RYHSQILFPG NWRGCSSFRR ELIHRYSSGD NAFFGISNGT RLQKSFVPQA TGSFLTGTIE KTEQPVSTFG SLCQNELDRI NYMVYNMSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA

Arabidopsis Description

Rhodanese/Cell cycle control phosphatase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J9G2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.