Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67812 | Canola | plastid | 69.97 | 72.18 |
| CDX98394 | Canola | plastid | 69.97 | 72.07 |
| Bra003389.1-P | Field mustard | plastid | 68.08 | 67.88 |
| GSMUA_Achr8P32230_001 | Banana | cytosol, plastid | 23.32 | 54.79 |
| VIT_05s0094g00820.t01 | Wine grape | plastid | 45.48 | 48.07 |
| KRH31574 | Soybean | plastid | 44.02 | 46.97 |
| KRG97340 | Soybean | plastid | 44.17 | 46.62 |
| Solyc03g059180.2.1 | Tomato | plastid | 33.97 | 43.63 |
| TraesCS3D01G392600.1 | Wheat | plastid | 36.44 | 41.74 |
| TraesCS3B01G430900.1 | Wheat | plastid | 36.01 | 41.24 |
| HORVU3Hr1G089650.2 | Barley | plastid | 35.42 | 40.43 |
| TraesCS3A01G398500.1 | Wheat | plastid | 35.28 | 40.4 |
| Zm00001d042526_P001 | Maize | plastid | 35.42 | 39.71 |
| Os01t0896500-01 | Rice | plasma membrane | 35.86 | 39.49 |
| EES04035 | Sorghum | plastid | 34.99 | 39.22 |
| GSMUA_Achr8P32240_001 | Banana | plastid | 17.06 | 29.18 |
| AT5G23060.1 | Thale cress | plastid | 9.33 | 16.54 |
Protein Annotations
| Gene3D:3.40.250.10 | MapMan:35.2 | EntrezGene:825147 | ProteinID:AEE79968.1 | ArrayExpress:AT3G59780 | EnsemblPlantsGene:AT3G59780 |
| RefSeq:AT3G59780 | TAIR:AT3G59780 | RefSeq:AT3G59780-TAIR-G | EnsemblPlants:AT3G59780.1 | TAIR:AT3G59780.1 | Unigene:At.43704 |
| UniProt:F4J9G2 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009579 |
| InterPro:IPR001763 | InterPro:IPR036873 | RefSeq:NP_191537.4 | PFAM:PF00581 | PO:PO:0000293 | PFscan:PS50206 |
| PANTHER:PTHR34209 | PANTHER:PTHR34209:SF1 | InterPro:Rhodanese-like_dom | InterPro:Rhodanese-like_dom_sf | SMART:SM00450 | SUPFAM:SSF52821 |
| UniParc:UPI0001E92EB6 | SEG:seg | : | : | : | : |
Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J9G2]
Coordinates
chr3:+:22086333..22090529
Molecular Weight (calculated)
73938.8 Da
IEP (calculated)
4.576
GRAVY (calculated)
-0.136
Length
686 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPLCSATSC RYHSQILFPG NWRGCSSFRR ELIHRYSSGD NAFFGISNGT RLQKSFVPQA TGSFLTGTIE KTEQPVSTFG SLCQNELDRI NYMVYNMSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.