Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67812 | Canola | plastid | 91.89 | 92.03 |
| Bra003389.1-P | Field mustard | plastid | 79.88 | 77.33 |
| AT3G59780.1 | Thale cress | plastid | 72.07 | 69.97 |
| GSMUA_Achr8P32230_001 | Banana | cytosol, plastid | 23.27 | 53.08 |
| VIT_05s0094g00820.t01 | Wine grape | plastid | 47.0 | 48.23 |
| KRH31574 | Soybean | plastid | 45.65 | 47.28 |
| KRG97340 | Soybean | plastid | 45.65 | 46.77 |
| Solyc03g059180.2.1 | Tomato | plastid | 33.78 | 42.13 |
| TraesCS3D01G392600.1 | Wheat | plastid | 37.09 | 41.24 |
| TraesCS3B01G430900.1 | Wheat | plastid | 36.94 | 41.07 |
| TraesCS3A01G398500.1 | Wheat | plastid | 36.94 | 41.07 |
| HORVU3Hr1G089650.2 | Barley | plastid | 36.64 | 40.6 |
| EES04035 | Sorghum | plastid | 36.64 | 39.87 |
| Zm00001d042526_P001 | Maize | plastid | 36.04 | 39.22 |
| Os01t0896500-01 | Rice | plasma membrane | 36.64 | 39.17 |
| GSMUA_Achr8P32240_001 | Banana | plastid | 18.02 | 29.93 |
| CDX71878 | Canola | nucleus, plastid | 2.85 | 18.63 |
| CDY62677 | Canola | plastid | 10.81 | 18.6 |
| CDY02202 | Canola | plastid | 10.81 | 18.6 |
| CDY23708 | Canola | plastid | 10.51 | 18.18 |
Protein Annotations
| EnsemblPlants:CDX98394 | EnsemblPlantsGene:GSBRNA2T00105977001 | Gene3D:3.40.250.10 | InterPro:IPR001763 | InterPro:IPR036873 | InterPro:Rhodanese-like_dom |
| InterPro:Rhodanese-like_dom_sf | PANTHER:PTHR34209 | PANTHER:PTHR34209:SF1 | PFAM:PF00581 | PFscan:PS50206 | ProteinID:CDX98394 |
| ProteinID:CDX98394.1 | SEG:seg | SMART:SM00450 | SUPFAM:SSF52821 | UniParc:UPI0004EE5AE5 | MapMan:35.2 |
Description
BnaC06g17550D
Coordinates
chrLK031904:+:1069456..1073238
Molecular Weight (calculated)
71089.0 Da
IEP (calculated)
4.618
GRAVY (calculated)
-0.208
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTLCSAASC HYHSQLLYHG NWRGCSSLRR ESIHRCSSGD NAFFGISNGT QNLHKSCLTQ ATGRFFTATI ENTEQTASTF RNLCENDLDR INYMRYDMRD
101: VRNGGLTYVE STADVPPVEA VVADDVSPVE SLSAETLTES TSSLIVSAEP GTGSSVGISP DSSLSLPDPT DLNQESLPDV KASFDDFSSG VNDSFSSSLN
201: QGENAVKNTL DSFSSSVTSI TKNASEAVDS AFKTAFSTLD QTGDVAGDKL SSFSGGLKEA SNGAASVAID LLRQSISTAE RSVANGVSFA AYSYGSAKEL
301: LPPGVKSAIN SSEDVALKVL KPLGAVLEQV YAAIGGLERN IGLNPDDPII HLVLIVGSTG TFWVLYRVWT YGGYAGDLSP KSTLELLSSR EKPVLVDVRP
401: EALREKDGIP DLRRAARFRY SSVTLPEVEG DVKRLLRGGR EVEDALAAVI IKNLKAVQDR SKVIVMDGDG TRSKGIARAL RKLGSPYLVQ GGFRAWVKEG
501: LRVKEPKPET TLIILNEEAE AILEEINPSP LQVAGVGVGA LAGSYALFEW EKTLQLIAVI GLGLTIYQRL ASYDDAEDFK QDVRQLFTPV KLGAQAFSWA
601: AGKLETNGVG LPTSPSSSDV RSRVLQAAAK HESQPSDDTS EGLQDASSSS SSSSEEALNN ADVSEA
101: VRNGGLTYVE STADVPPVEA VVADDVSPVE SLSAETLTES TSSLIVSAEP GTGSSVGISP DSSLSLPDPT DLNQESLPDV KASFDDFSSG VNDSFSSSLN
201: QGENAVKNTL DSFSSSVTSI TKNASEAVDS AFKTAFSTLD QTGDVAGDKL SSFSGGLKEA SNGAASVAID LLRQSISTAE RSVANGVSFA AYSYGSAKEL
301: LPPGVKSAIN SSEDVALKVL KPLGAVLEQV YAAIGGLERN IGLNPDDPII HLVLIVGSTG TFWVLYRVWT YGGYAGDLSP KSTLELLSSR EKPVLVDVRP
401: EALREKDGIP DLRRAARFRY SSVTLPEVEG DVKRLLRGGR EVEDALAAVI IKNLKAVQDR SKVIVMDGDG TRSKGIARAL RKLGSPYLVQ GGFRAWVKEG
501: LRVKEPKPET TLIILNEEAE AILEEINPSP LQVAGVGVGA LAGSYALFEW EKTLQLIAVI GLGLTIYQRL ASYDDAEDFK QDVRQLFTPV KLGAQAFSWA
601: AGKLETNGVG LPTSPSSSDV RSRVLQAAAK HESQPSDDTS EGLQDASSSS SSSSEEALNN ADVSEA
001: MFPLCSATSC RYHSQILFPG NWRGCSSFRR ELIHRYSSGD NAFFGISNGT RLQKSFVPQA TGSFLTGTIE KTEQPVSTFG SLCQNELDRI NYMVYNMSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA
Arabidopsis Description
Rhodanese/Cell cycle control phosphatase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J9G2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.