Factsheet for Bra003389.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67812	Canola	plastid	78.78	81.5
CDX98394	Canola	plastid	77.33	79.88
AT3G59780.1	Thale cress	plastid	67.88	68.08
GSMUA_Achr8P32230_001	Banana	cytosol, plastid	22.09	52.05
VIT_05s0094g00820.t01	Wine grape	plastid	44.62	47.3
KRH31574	Soybean	plastid	41.86	44.79
KRG97340	Soybean	plastid	41.72	44.15
Solyc03g059180.2.1	Tomato	plastid	32.99	42.51
TraesCS3D01G392600.1	Wheat	plastid	34.88	40.07
TraesCS3B01G430900.1	Wheat	plastid	34.59	39.73
TraesCS3A01G398500.1	Wheat	plastid	34.59	39.73
HORVU3Hr1G089650.2	Barley	plastid	34.59	39.6
Os01t0896500-01	Rice	plasma membrane	34.74	38.36
Zm00001d042526_P001	Maize	plastid	34.01	38.24
EES04035	Sorghum	plastid	34.01	38.24
GSMUA_Achr8P32240_001	Banana	plastid	17.01	29.18
Bra013013.1-P	Field mustard	plastid	9.59	17.05
Bra037620.1-P	Field mustard	cytosol, peroxisome, plastid	6.54	16.67

Protein Annotations

Gene3D:3.40.250.10	MapMan:35.2	EnsemblPlantsGene:Bra003389	EnsemblPlants:Bra003389.1	EnsemblPlants:Bra003389.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009579	InterPro:IPR001763	InterPro:IPR036873	UniProt:M4CGQ6	PFscan:PS50206
PANTHER:PTHR34209	PANTHER:PTHR34209:SF1	InterPro:Rhodanese-like_dom	InterPro:Rhodanese-like_dom_sf	SUPFAM:SSF52821	UniParc:UPI000254177E
SEG:seg	:	:	:	:	:

Description

AT3G59780 (E=1e-119) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; BEST Arabidopsis thaliana protein match is: CaS (Calcium sensing receptor) (TAIR:AT5G23060.1); Has 1338 Blast hits to 316 proteins in 95 species: Archae - 0; Bacteria - 274; Metazoa - 264; Fungi - 88; Plants - 42; Viruses - 4; Other Eukaryotes - 666 (source: NCBI BLink).

Coordinates

chrA07:+:12964732..12967942

Molecular Weight (calculated)

73504.8 Da

IEP (calculated)

4.474

GRAVY (calculated)

-0.198

Length

688 amino acids

Sequence
(BLAST)

001: MFTLCSAASC HYHSQLLYHG NWRGYSSLRR ESIHRCSSGD TSFFGISNGT QSLQKSFLTQ ATGRFFTATI ENTEQTSSTF RNLCENELDR INYMVYDMRD
101: VRNGGLTYVE STSDVSPVEA VVADGSPLEA IVADLSPVEA VVTDASPLDA IVADVSPVEA LVADVPPVEN PAAETLTERT SSLIVSAEPG TGSSVDISPD
201: TSLSLPDPTD LNQESLPDVK ASFDDFSSGV KDSFSSSLNQ GENAVKNTLD SFSSSVTSIT KNASEAVDNA FKTAFSTLDQ TGDVAGDKLS SFSGGLKEAS
301: NGAASLAIDL LRQSISTAER SVANGVSFAA YSYGSAKELL PPDVKSAINS SEDVALKVLR PLGAVLEQVY AAIGGLERNI GLNPDDPIIH LVLIVGSTGT
401: FWVLYRVWTY GGYAGDLSPK STLELLSSRE KSVLVDVRPE ALREKDGIPD LRRGARFRYS SVALPEVEGD VKRLLRGGRE VEDALAAVII KNLKAVQDRS
501: KVIVMDADGT RSKGIARALR KLGIKASGFR SWVKEGLRVK EPKPETTLTI LNEEAEAILE EINPSPLQVA GVEWEKTLQL IAVIGLGLTI YQRLASYDDS
601: EDFKQDVRQL FTPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESQPS DETSEGLQDA SSSSSSGEAL NNADVSEA

Best Arabidopsis Sequence Match ( AT3G59780.1 )
(BLAST)

001: MFPLCSATSC RYHSQILFPG NWRGCSSFRR ELIHRYSSGD NAFFGISNGT RLQKSFVPQA TGSFLTGTIE KTEQPVSTFG SLCQNELDRI NYMVYNMSEA
101: FVASDEGLTY VENGEDVFPV EAVAADVSPV EAVVPDVSPI ECLSAETLTD KTSSLIDSVE SGTNATVKIS PDSSVSLPDA KASFDDFSSG LKQSFSSSLP
201: DAKASVDDFS SGVKESFSSS LNQGENAVKN TLESFSSSVT SITKNASEVV DSAVNRAFST LDQTGDVAGD KFSSFSTGLK EASNRAAVIA IDLLRQSVSL
301: GERSVTNGVS FVVYSYGSAK ELLPPDVKSA LNSSEDVALK VLSPVGAVLQ QVSVAIGGLE RNIGLDPDDP ILHLFLFVGT TGTFWVLYRV WTYGGYAGDL
401: SPKSTLDLLK SRDKSVLIDV RPEALREKDG IPDLRRSARF RYSSVTLPEV DGDVKRLLKG GSEVDDILTA VIIKNLKIVQ DRSKVVVMDA DGTRSKGIAR
501: ALRKVGIKRP YLMQGGYRSW VQEGLRVKEP KPETTLTILN EEAEAIFEDI NPSPLQLFGV GVGFFAALYA LSEWEKTLQL IAVIGLSLTI YLRLSSYDDS
601: EDFKQDVRLL LAPVKLGAQA FSWAAGKLET NGVGLPTSPS SSDVRSRVLQ AAAKHESKPS DETSESLQDA SSSPEEALNN VDVSEA

Arabidopsis Description

Rhodanese/Cell cycle control phosphatase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J9G2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.