Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra035669.1-P | |
| Bra038815.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14870.1 | Bra038815.1-P | AT2G18710.1 | 10207046 |
| AT4G14870.1 | Bra038815.1-P | AT2G18710.1 | 15988575 |
| AT4G14870.1 | Bra035669.1-P | AT2G28800.1 | 15988575 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29777 | Canola | plastid | 100.0 | 100.0 |
| AT4G14870.1 | Thale cress | plastid | 75.14 | 73.45 |
| KRH77853 | Soybean | plastid | 41.04 | 45.81 |
| VIT_05s0020g03510.t01 | Wine grape | plastid | 42.2 | 43.45 |
| PGSC0003DMT400082126 | Potato | plastid | 40.46 | 39.11 |
| EER87959 | Sorghum | plastid | 41.04 | 38.59 |
| TraesCS2B01G290700.1 | Wheat | plastid | 37.57 | 37.79 |
| Zm00001d045144_P001 | Maize | plastid | 39.88 | 37.5 |
| TraesCS2A01G272500.1 | Wheat | plastid | 36.99 | 37.21 |
| GSMUA_Achr3P05390_001 | Banana | mitochondrion | 35.84 | 33.88 |
| Os04t0306750-01 | Rice | mitochondrion, nucleus, plastid | 38.15 | 33.0 |
| TraesCS2D01G271800.1 | Wheat | plastid | 35.84 | 29.95 |
| Os08t0399050-00 | Rice | extracellular, plasma membrane | 30.06 | 17.69 |
Protein Annotations
| Gene3D:1.20.5.1030 | MapMan:23.1.5.3 | EnsemblPlantsGene:Bra036909 | EnsemblPlants:Bra036909.1 | EnsemblPlants:Bra036909.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006605 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009507 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015450 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0071806 | InterPro:IPR038379 | UniProt:M4F749 | HAMAP:MF_00422 | PFAM:PF00584 |
| PANTHER:PTHR37240 | InterPro:SecE | InterPro:SecE_bac | InterPro:SecE_sf | TIGRFAMs:TIGR00964 | TMHMM:TMhelix |
| InterPro:Translocase_SecE/Sec61-g | UniParc:UPI0002545001 | SEG:seg | : | : | : |
Description
AT4G14870 (E=3e-060) | P-P-bond-hydrolysis-driven protein transmembrane transporter
Coordinates
chrA01:-:12148894..12149415
Molecular Weight (calculated)
18599.2 Da
IEP (calculated)
4.587
GRAVY (calculated)
-0.114
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTAQFSPP VTGINIRLRK TASLPSTLSP FHTEIRTPAM ICVRKSPYLV AKAIEQSRDT AGSESEQEAT PSPGESGKGE KEVEISELGA EIKAAMEQRK
101: AAEEEEGKNE FLSGVAEEVR EIEWPAFQKV VGTTGVVLGV IAGSSVVLLT VNFLLAELSD RVFIGKGVQD FFS
101: AAEEEEGKNE FLSGVAEEVR EIEWPAFQKV VGTTGVVLGV IAGSSVVLLT VNFLLAELSD RVFIGKGVQD FFS
001: MSLTAQFSPP VTGITRSLRD TKPSLSNLRV FPVYTEIRTM TTSNLRKSAC FVAKAIEQRR DTAGSESESE ATPSPAEESG SGEDKEVEIS AIGAEIKAAM
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
Arabidopsis Description
SECE1SECE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ24]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.