Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036909.1-P | Field mustard | plastid | 73.45 | 75.14 |
| CDY29777 | Canola | plastid | 73.45 | 75.14 |
| KRH77853 | Soybean | plastid | 37.29 | 42.58 |
| VIT_05s0020g03510.t01 | Wine grape | plastid | 40.11 | 42.26 |
| PGSC0003DMT400082126 | Potato | plastid | 41.24 | 40.78 |
| TraesCS2A01G272500.1 | Wheat | plastid | 38.42 | 39.53 |
| TraesCS2B01G290700.1 | Wheat | plastid | 37.85 | 38.95 |
| EER87959 | Sorghum | plastid | 40.11 | 38.59 |
| Zm00001d045144_P001 | Maize | plastid | 40.11 | 38.59 |
| GSMUA_Achr3P05390_001 | Banana | mitochondrion | 35.59 | 34.43 |
| Os04t0306750-01 | Rice | mitochondrion, nucleus, plastid | 36.72 | 32.5 |
| TraesCS2D01G271800.1 | Wheat | plastid | 37.29 | 31.88 |
| Os08t0399050-00 | Rice | extracellular, plasma membrane | 28.25 | 17.01 |
Protein Annotations
| Gene3D:1.20.5.1030 | MapMan:23.1.5.3 | EntrezGene:827144 | UniProt:A0A178UZ24 | ProteinID:AEE83511.1 | ArrayExpress:AT4G14870 |
| EnsemblPlantsGene:AT4G14870 | RefSeq:AT4G14870 | TAIR:AT4G14870 | RefSeq:AT4G14870-TAIR-G | EnsemblPlants:AT4G14870.1 | TAIR:AT4G14870.1 |
| EMBL:AY045827 | EMBL:AY096484 | ProteinID:CAB10266.1 | ProteinID:CAB78529.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006605 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009306 |
| GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0015450 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0071806 | InterPro:IPR038379 | HAMAP:MF_00422 |
| RefSeq:NP_567446.1 | UniProt:O23342 | ProteinID:OAO97931.1 | PFAM:PF00584 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR37240 | Symbol:SECE1 |
| InterPro:SecE | InterPro:SecE_bac | InterPro:SecE_sf | TIGRFAMs:TIGR00964 | TMHMM:TMhelix | InterPro:Translocase_SecE/Sec61-g |
| UniParc:UPI00000A192E | SEG:seg | : | : | : | : |
Description
SECE1SECE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ24]
Coordinates
chr4:+:8517100..8517954
Molecular Weight (calculated)
19121.6 Da
IEP (calculated)
4.597
GRAVY (calculated)
-0.174
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTAQFSPP VTGITRSLRD TKPSLSNLRV FPVYTEIRTM TTSNLRKSAC FVAKAIEQRR DTAGSESESE ATPSPAEESG SGEDKEVEIS AIGAEIKAAM
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.