Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr4P12710_001 | |
GSMUA_Achr5P28630_001 | |
GSMUA_Achr9P03990_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH77853 | Soybean | plastid | 38.25 | 45.16 |
Zm00001d045144_P001 | Maize | plastid | 40.44 | 40.22 |
EER87959 | Sorghum | plastid | 39.89 | 39.67 |
TraesCS2B01G290700.1 | Wheat | plastid | 37.16 | 39.53 |
TraesCS2A01G272500.1 | Wheat | plastid | 36.61 | 38.95 |
PGSC0003DMT400082126 | Potato | plastid | 35.52 | 36.31 |
VIT_05s0020g03510.t01 | Wine grape | plastid | 33.33 | 36.31 |
Bra036909.1-P | Field mustard | plastid | 33.88 | 35.84 |
CDY29777 | Canola | plastid | 33.88 | 35.84 |
AT4G14870.1 | Thale cress | plastid | 34.43 | 35.59 |
TraesCS2D01G271800.1 | Wheat | plastid | 37.16 | 32.85 |
Os04t0306750-01 | Rice | mitochondrion, nucleus, plastid | 34.97 | 32.0 |
Os08t0399050-00 | Rice | extracellular, plasma membrane | 30.6 | 19.05 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P05390_001 | EnsemblPlants:GSMUA_Achr3T05390_001 | EnsemblPlantsGene:GSMUA_Achr3G05390_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
ncoils:Coil | PANTHER:PTHR37240 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294E1C2 | UniProt:M0SC07 |
MapMan:23.1.5.3 | : | : | : | : | : |
Description
Putative Phosphoglycerate kinase [Source:GMGC_GENE;Acc:GSMUA_Achr3G05390_001]
Coordinates
chr3:+:3563607..3564273
Molecular Weight (calculated)
19703.5 Da
IEP (calculated)
5.402
GRAVY (calculated)
-0.280
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAPFSRLL LKPPPPPRAV PFRAALPVHL HPVPAQYSPL RLSSPLRLPG TRRPRRFSAQ ENGGASETLE ESEADEGRKK EQEEEVEKRD TAASTAAASV
101: AEELKEMMEA RKKESSSSSS DLWGGVADEV REIEWPPFGK VLGTTGVVIA VIAGSSVALL TVNAILAEIS DKVFAGKGIQ DFF
101: AEELKEMMEA RKKESSSSSS DLWGGVADEV REIEWPPFGK VLGTTGVVIA VIAGSSVALL TVNAILAEIS DKVFAGKGIQ DFF
001: MSLTAQFSPP VTGITRSLRD TKPSLSNLRV FPVYTEIRTM TTSNLRKSAC FVAKAIEQRR DTAGSESESE ATPSPAEESG SGEDKEVEIS AIGAEIKAAM
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
101: EQRKTAEEEK GKNEFLSGVA EEVKEIEWPA FQKVLGTTGV VLGVIAGSSV VLLTVNFLLA ELSDRVFIGR GVQDFFS
Arabidopsis Description
SECE1SECE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ24]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.